Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter nyackensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1845598 bp
Thymine Count
1830306 bp
Guanine Count
1224599 bp
Cytosine Count
1175798 bp
Genome Length
6077111 bp
Protein-coding Genes
4968 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 4-epimerase | SAMN04488101_10339 | Not Available | Positive | 1975297 - 1976253 | 35136.5 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488101_10340 | Not Available | Positive | 1976246 - 1977376 | 42035.6 |
| udp-2-acetamido-3-amino-2,3-dideoxy-glucuronate n-acetyltransferase | SAMN04488101_10341 | Not Available | Positive | 1977360 - 1977956 | 21496.6 |
| predicted dehydrogenase | SAMN04488101_10342 | Not Available | Positive | 1977958 - 1978980 | 38926.4 |
| udp-glucose 4-epimerase | SAMN04488101_10343 | Not Available | Positive | 1978983 - 1979957 | 36125.2 |
| l-2-hydroxyglutarate oxidase | SAMN04488101_10344 | Not Available | Positive | 1979961 - 1981166 | 44803.3 |
| d-alanyl-lipoteichoic acid acyltransferase dltb, mboat superfamily | SAMN04488101_10345 | Not Available | Positive | 1981195 - 1982619 | 55462.1 |
| hypothetical protein | SAMN04488101_10346 | Not Available | Positive | 1982621 - 1983592 | 38141.9 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488101_10347 | Not Available | Positive | 1983585 - 1984727 | 42464.1 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04488101_10348 | Not Available | Positive | 1984728 - 1986620 | 73029.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
