Halogeometricum borinquense DSM 11551

Gram-negativeNon-motileAerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) is an aerobic, extremely halophilic archaeon isolated from the solar salterns of Cabo Rojo, Puerto-Rico. The cells are highly pleomorphic (short and long rods, squares, triangles and ovals) and motile by peritrichous flagella. Gas vesicles are present and are responsible for modifying the color of colonies or cell suspensions from red to pink. H. borinquense requires extremely high salt (NaCl) concentrations for growth. It can not only grow aerobically but also anaerobically using nitrate as electron acceptor. At least 8% NaCl (w/v) is required for growth, reflecting the primary characteristic requirement for high salt concentrations of the Halobacteriaceae. The optimal NaCl concentration range is 20-25NaCl (w/v) at 40 degrees Celsius. The temperature range for growth is between 22 and 50 degrees Celsius, with an optimum at 40 degrees Celsius. Nitrate is reduced to nitrite with the production of gas. (Adapted from PMID 21304651). (HAMAP: HALBP)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum borinquense
StrainDSM 11551

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature40
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Halogeometricum borinquense DSM 11551 plasmid pHBOR01, complete

Gene Summary

Adenine Count

78427 bp

Thymine Count

80570 bp

Guanine Count

101757 bp

Cytosine Count

101440 bp

Genome Length

362194 bp

Protein-coding Genes

314 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
precorrin-3b c(17)-methyltransferaseHBOR_RS01685Not AvailableNegative334830 - 33568130767.2
cobalt-precorrin 5a hydrolaseHBOR_RS01690Not AvailableNegative335678 - 33664034184.5
cobalt-precorrin-4/precorrin-4 c(11)-methyltransferaseHBOR_RS01695Not AvailableNegative336637 - 33748230053.4
cobalt-factor ii c(20)-methyltransferaseHBOR_RS01700Not AvailableNegative337479 - 33820726148.5
precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbitHBOR_RS01705Not AvailableNegative338207 - 33876420041.7
energy-coupling factor abc transporter permeaseHBOR_RS01710Not AvailablePositive338930 - 33959222749.3
energy-coupling factor abc transporter substrate-binding proteinHBOR_RS01715Not AvailablePositive339589 - 3398619408.3
cobalt ecf transporter t component cbiqHBOR_RS01720Not AvailablePositive339845 - 34057626816.0
energy-coupling factor abc transporter atp-binding proteinHBOR_RS01725Not AvailablePositive340573 - 34126825157.7
helix-turn-helix domain-containing proteinHBOR_RS01730Not AvailablePositive341368 - 34201224449.8

Displaying genes 661 – 670 of 3552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.