Halogeometricum borinquense DSM 11551

Gram-negativeNon-motileAerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) is an aerobic, extremely halophilic archaeon isolated from the solar salterns of Cabo Rojo, Puerto-Rico. The cells are highly pleomorphic (short and long rods, squares, triangles and ovals) and motile by peritrichous flagella. Gas vesicles are present and are responsible for modifying the color of colonies or cell suspensions from red to pink. H. borinquense requires extremely high salt (NaCl) concentrations for growth. It can not only grow aerobically but also anaerobically using nitrate as electron acceptor. At least 8% NaCl (w/v) is required for growth, reflecting the primary characteristic requirement for high salt concentrations of the Halobacteriaceae. The optimal NaCl concentration range is 20-25NaCl (w/v) at 40 degrees Celsius. The temperature range for growth is between 22 and 50 degrees Celsius, with an optimum at 40 degrees Celsius. Nitrate is reduced to nitrite with the production of gas. (Adapted from PMID 21304651). (HAMAP: HALBP)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum borinquense
StrainDSM 11551

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature40
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Halogeometricum borinquense DSM 11551 plasmid pHBOR01, complete

Gene Summary

Adenine Count

78427 bp

Thymine Count

80570 bp

Guanine Count

101757 bp

Cytosine Count

101440 bp

Genome Length

362194 bp

Protein-coding Genes

314 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinHBOR_RS01590Not AvailablePositive312081 - 31379364244.1
abc transporter permeaseHBOR_RS01595Not AvailablePositive313857 - 31483436168.0
abc transporter permeaseHBOR_RS01600Not AvailablePositive314838 - 31581835695.7
abc transporter atp-binding proteinHBOR_RS01605Not AvailablePositive315815 - 31685238393.3
abc transporter atp-binding proteinHBOR_RS01610Not AvailablePositive316855 - 31798541353.6
metallopeptidase tldd-related proteinHBOR_RS01615Not AvailableNegative317994 - 31944852187.1
hypothetical proteinHBOR_RS01620Not AvailableNegative319540 - 3197828670.4
abc transporter substrate-binding proteinHBOR_RS01625Not AvailableNegative319851 - 32103544444.3
swim zinc finger family proteinHBOR_RS20550Not AvailableNegative321238 - 3212821590.91
swim zinc finger family proteinHBOR_RS01630Not AvailableNegative321270 - 32255045569.0

Displaying genes 641 – 650 of 3552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.