Halogeometricum borinquense DSM 11551

Gram-negativeNon-motileAerobic

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halogeometricum

Description

Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) is an aerobic, extremely halophilic archaeon isolated from the solar salterns of Cabo Rojo, Puerto-Rico. The cells are highly pleomorphic (short and long rods, squares, triangles and ovals) and motile by peritrichous flagella. Gas vesicles are present and are responsible for modifying the color of colonies or cell suspensions from red to pink. H. borinquense requires extremely high salt (NaCl) concentrations for growth. It can not only grow aerobically but also anaerobically using nitrate as electron acceptor. At least 8% NaCl (w/v) is required for growth, reflecting the primary characteristic requirement for high salt concentrations of the Halobacteriaceae. The optimal NaCl concentration range is 20-25NaCl (w/v) at 40 degrees Celsius. The temperature range for growth is between 22 and 50 degrees Celsius, with an optimum at 40 degrees Celsius. Nitrate is reduced to nitrite with the production of gas. (Adapted from PMID 21304651). (HAMAP: HALBP)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalogeometricum
SpeciesHalogeometricum borinquense
StrainDSM 11551

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature40
Temperature rangeMesophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Halogeometricum borinquense DSM 11551 plasmid pHBOR01, complete

Gene Summary

Adenine Count

78427 bp

Thymine Count

80570 bp

Guanine Count

101757 bp

Cytosine Count

101440 bp

Genome Length

362194 bp

Protein-coding Genes

314 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-6HBOR_RS00505Not AvailableNegative92297 - 9296222760.5
50s ribosomal protein l31eHBOR_RS00510Not AvailableNegative92965 - 9324310459.3
50s ribosomal protein l39eHBOR_RS00515Not AvailableNegative93247 - 933996104.48
dmt family transporterHBOR_RS00520Not AvailablePositive93577 - 9451833345.1
rna 2',3'-cyclic phosphodiesteraseHBOR_RS00525Not AvailableNegative94537 - 9510020801.9
arylamine n-acetyltransferase family proteinHBOR_RS00530Not AvailableNegative95157 - 9594229319.1
tetratricopeptide repeat proteinHBOR_RS00535Not AvailablePositive96085 - 9683128415.0
duf424 domain-containing proteinHBOR_RS00540Not AvailablePositive96831 - 9713310912.7
bifunctional cysteine desulfurase/selenocysteine lyase sufsHBOR_RS00545Not AvailablePositive97319 - 9859046801.4
fe-s cluster assembly sulfur transfer protein sufuHBOR_RS00550Not AvailablePositive98715 - 9914015384.8

Displaying genes 421 – 430 of 3552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.