Steroidobacter denitrificans str. DSM 18526

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Steroidobacterales

Family

Steroidobacteraceae

Genus

Steroidobacter

Description

Steroidobacter denitrificans strain DSM 18526 is a Gram-negative, non-spore-forming rod-shaped bacterium that exhibits optimal growth at a temperature of 29.0 °C. This species is notable for its involvement in the biogeochemical cycling of nitrogen, specifically through denitrification processes. The Gram-negative cell wall structure of S. denitrificans is characterized by a thin peptidoglycan layer sandwiched between an inner cytoplasmic membrane and an outer membrane containing lipopolysaccharides, which may influence its interactions with the surrounding environment and other microorganisms. As a rod-shaped organism, it possesses a morphology that is common among many bacteria, potentially allowing for efficient nutrient uptake and motility in various habitats. While S. denitrificans is non-spore-forming, its metabolic capabilities suggest a resilience to fluctuating environmental conditions, particularly in anaerobic environments where denitrification occurs. The optimal growth temperature of 29.0 °C indicates a preference for mesophilic conditions, which aligns with many soil-dwelling bacteria. Understanding the traits of Steroidobacter denitrificans str. DSM 18526 contributes to a broader comprehension of microbial roles in nitrogen cycling, particularly in ecosystems where denitrification is crucial for maintaining nitrogen balance and mitigating the impacts of excess nitrogen in the environment. This underscores the significance of such bacteria in sustainable agricultural practices and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderSteroidobacterales
FamilySteroidobacteraceae
GenusSteroidobacter
SpeciesSteroidobacter denitrificans
StrainDSM 18526

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Steroidobacter denitrificans strain DSM 18526 chromosome, complete

Gene Summary

Adenine Count

664502 bp

Thymine Count

664781 bp

Guanine Count

1071959 bp

Cytosine Count

1066004 bp

Genome Length

3467246 bp

Protein-coding Genes

3089 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein tolqACG33_RS08600Not AvailableNegative1886550 - 188733528510.5
tol-pal system-associated acyl-coa thioesteraseACG33_RS08605Not AvailableNegative1887336 - 188775815964.4
holliday junction branch migration dna helicase ruvbACG33_RS08610Not AvailableNegative1887755 - 188879237748.7
holliday junction branch migration protein ruvaACG33_RS08615Not AvailableNegative1888801 - 188940321656.5
crossover junction endodeoxyribonuclease ruvcACG33_RS08620Not AvailableNegative1889400 - 188991518154.1
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseACG33_RS08625Not AvailablePositive1890122 - 189243485906.5
dihydrolipoyl dehydrogenaseACG33_RS08630Not AvailableNegative1892530 - 189395450566.1
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseACG33_RS08635Not AvailableNegative1894064 - 189530543852.0
2-oxoglutarate dehydrogenase e1 componentACG33_RS08640Not AvailableNegative1895335 - 1898247107778.0
iclr family transcriptional regulatorACG33_RS08645Not AvailableNegative1898517 - 189937730918.4

Displaying genes 1731 – 1740 of 3144 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.