Steroidobacter denitrificans str. DSM 18526

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Steroidobacterales

Family

Steroidobacteraceae

Genus

Steroidobacter

Description

Steroidobacter denitrificans strain DSM 18526 is a Gram-negative, non-spore-forming rod-shaped bacterium that exhibits optimal growth at a temperature of 29.0 °C. This species is notable for its involvement in the biogeochemical cycling of nitrogen, specifically through denitrification processes. The Gram-negative cell wall structure of S. denitrificans is characterized by a thin peptidoglycan layer sandwiched between an inner cytoplasmic membrane and an outer membrane containing lipopolysaccharides, which may influence its interactions with the surrounding environment and other microorganisms. As a rod-shaped organism, it possesses a morphology that is common among many bacteria, potentially allowing for efficient nutrient uptake and motility in various habitats. While S. denitrificans is non-spore-forming, its metabolic capabilities suggest a resilience to fluctuating environmental conditions, particularly in anaerobic environments where denitrification occurs. The optimal growth temperature of 29.0 °C indicates a preference for mesophilic conditions, which aligns with many soil-dwelling bacteria. Understanding the traits of Steroidobacter denitrificans str. DSM 18526 contributes to a broader comprehension of microbial roles in nitrogen cycling, particularly in ecosystems where denitrification is crucial for maintaining nitrogen balance and mitigating the impacts of excess nitrogen in the environment. This underscores the significance of such bacteria in sustainable agricultural practices and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderSteroidobacterales
FamilySteroidobacteraceae
GenusSteroidobacter
SpeciesSteroidobacter denitrificans
StrainDSM 18526

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Steroidobacter denitrificans strain DSM 18526 chromosome, complete

Gene Summary

Adenine Count

664502 bp

Thymine Count

664781 bp

Guanine Count

1071959 bp

Cytosine Count

1066004 bp

Genome Length

3467246 bp

Protein-coding Genes

3089 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heparinase ii/iii family proteinACG33_RS07355Not AvailablePositive1623327 - 162480555417.9
glycosyltransferase family 4 proteinACG33_RS07360Not AvailablePositive1624896 - 162623948719.0
isomerizing glutamine--fructose-6-phosphate transaminaseACG33_RS07365Not AvailablePositive1626239 - 162734839818.8
molecular chaperoneACG33_RS07370Not AvailableNegative1627450 - 162814825884.5
tcfc e-set like domain-containing proteinACG33_RS07375Not AvailableNegative1628151 - 163064090093.0
hypothetical proteinACG33_RS07380Not AvailableNegative1630807 - 163149623782.0
polysaccharide export proteinACG33_RS07385Not AvailablePositive1632058 - 163308037307.7
polysaccharide biosynthesis tyrosine autokinaseACG33_RS07390Not AvailablePositive1633115 - 163534682088.5
non-hydrolyzing udp-n-acetylglucosamine 2-epimeraseACG33_RS07395Not AvailablePositive1635366 - 163650242288.1
oligosaccharide flippase family proteinACG33_RS07400Not AvailablePositive1636521 - 163786446880.4

Displaying genes 1481 – 1490 of 3144 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.