Steroidobacter denitrificans str. DSM 18526

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Steroidobacterales

Family

Steroidobacteraceae

Genus

Steroidobacter

Description

Steroidobacter denitrificans strain DSM 18526 is a Gram-negative, non-spore-forming rod-shaped bacterium that exhibits optimal growth at a temperature of 29.0 °C. This species is notable for its involvement in the biogeochemical cycling of nitrogen, specifically through denitrification processes. The Gram-negative cell wall structure of S. denitrificans is characterized by a thin peptidoglycan layer sandwiched between an inner cytoplasmic membrane and an outer membrane containing lipopolysaccharides, which may influence its interactions with the surrounding environment and other microorganisms. As a rod-shaped organism, it possesses a morphology that is common among many bacteria, potentially allowing for efficient nutrient uptake and motility in various habitats. While S. denitrificans is non-spore-forming, its metabolic capabilities suggest a resilience to fluctuating environmental conditions, particularly in anaerobic environments where denitrification occurs. The optimal growth temperature of 29.0 °C indicates a preference for mesophilic conditions, which aligns with many soil-dwelling bacteria. Understanding the traits of Steroidobacter denitrificans str. DSM 18526 contributes to a broader comprehension of microbial roles in nitrogen cycling, particularly in ecosystems where denitrification is crucial for maintaining nitrogen balance and mitigating the impacts of excess nitrogen in the environment. This underscores the significance of such bacteria in sustainable agricultural practices and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderSteroidobacterales
FamilySteroidobacteraceae
GenusSteroidobacter
SpeciesSteroidobacter denitrificans
StrainDSM 18526

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Steroidobacter denitrificans strain DSM 18526 chromosome, complete

Gene Summary

Adenine Count

664502 bp

Thymine Count

664781 bp

Guanine Count

1071959 bp

Cytosine Count

1066004 bp

Genome Length

3467246 bp

Protein-coding Genes

3089 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic murein transglycosylase bACG33_RS06355Not AvailableNegative1414808 - 141581838026.4
rod shape-determining protein rodaACG33_RS06360Not AvailableNegative1415856 - 141699540545.1
penicillin-binding protein 2ACG33_RS06365Not AvailableNegative1416992 - 141895671570.9
rod shape-determining protein mredACG33_RS06370Not AvailableNegative1418963 - 141944818083.0
rod shape-determining protein mrecACG33_RS06375Not AvailableNegative1419445 - 142029030812.7
rod shape-determining proteinACG33_RS06380Not AvailableNegative1420495 - 142153837201.0
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcACG33_RS06385Not AvailablePositive1421719 - 142200910700.8
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataACG33_RS06390Not AvailablePositive1422137 - 142359152328.5
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatbACG33_RS06395Not AvailablePositive1423591 - 142504253106.5
hsp33 family molecular chaperone hsloACG33_RS06400Not AvailablePositive1425056 - 142611438338.5

Displaying genes 1281 – 1290 of 3144 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.