Rhizobium oryzae str. 1.7048

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Xaviernesmea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusXaviernesmea
SpeciesXaviernesmea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xaviernesmea oryzae strain 1.7048 scaffold9, whole genome shotgun

Gene Summary

Adenine Count

1006706 bp

Thymine Count

999136 bp

Guanine Count

1693125 bp

Cytosine Count

1691729 bp

Genome Length

5391466 bp

Protein-coding Genes

4616 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional regulatorBJF93_07515Not AvailablePositive813433 - 81438934532.6
dihydroxyacetone kinase subunit lBJF93_07520Not AvailableNegative814517 - 81628361330.6
abc transporter permeaseBJF93_07525Not AvailableNegative816318 - 81728033170.4
sugar abc transporter atp-binding proteinBJF93_07530Not AvailableNegative817270 - 81876954368.4
sugar abc transporter substrate-binding proteinBJF93_07535Not AvailableNegative818948 - 81989533079.5
gluconate 5-dehydrogenaseBJF93_07540Not AvailablePositive820604 - 82135926015.1
hydrolaseBJF93_07545Not AvailablePositive821611 - 82212619098.8
mfs transporterBJF93_07550Not AvailableNegative822182 - 82342343479.1
lysr family transcriptional regulatorBJF93_07555Not AvailableNegative823604 - 82448530975.6
decarboxylaseBJF93_07560Not AvailablePositive824594 - 82499515051.8

Displaying genes 711 – 720 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.