Rhizobium oryzae str. 1.7048

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Xaviernesmea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusXaviernesmea
SpeciesXaviernesmea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xaviernesmea oryzae strain 1.7048 scaffold9, whole genome shotgun

Gene Summary

Adenine Count

1006706 bp

Thymine Count

999136 bp

Guanine Count

1693125 bp

Cytosine Count

1691729 bp

Genome Length

5391466 bp

Protein-coding Genes

4616 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-dehydro-2-deoxygluconokinaseBJF93_18545Not AvailablePositive539755 - 54168969860.6
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)BJF93_18550Not AvailablePositive541786 - 54365165830.8
myo-inosose-2 dehydrataseBJF93_18555Not AvailablePositive543692 - 54459132995.0
5-deoxy-glucuronate isomeraseBJF93_18560Not AvailablePositive544793 - 54560529438.8
serine/threonine protein phosphataseBJF93_18565Not AvailablePositive545702 - 54706648475.0
hypothetical proteinBJF93_18575Not AvailablePositive547590 - 54839328867.5
lysine transporter lyseBJF93_18580Not AvailablePositive548503 - 54911421645.4
glycerol-3-phosphataseBJF93_18585Not AvailablePositive549466 - 55008621521.6
trehalose-phosphataseBJF93_18590Not AvailablePositive550223 - 55097826573.2
alpha,alpha-trehalose-phosphate synthase (udp-forming)BJF93_18595Not AvailablePositive551147 - 55253251599.8

Displaying genes 471 – 480 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.