Rhizobium oryzae str. 1.7048

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Xaviernesmea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusXaviernesmea
SpeciesXaviernesmea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xaviernesmea oryzae strain 1.7048 scaffold9, whole genome shotgun

Gene Summary

Adenine Count

1006706 bp

Thymine Count

999136 bp

Guanine Count

1693125 bp

Cytosine Count

1691729 bp

Genome Length

5391466 bp

Protein-coding Genes

4616 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii 3-dehydroquinate dehydrataseBJF93_12365Not AvailableNegative130569 - 13100616128.2
shikimate dehydrogenaseBJF93_12370Not AvailableNegative131003 - 13187230951.2
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive132016 - 132435Not Available
glutamine abc transporter atp-binding proteinBJF93_12375Not AvailableNegative132145 - 13290627920.0
abc transporter substrate-binding proteinBJF93_12380Not AvailableNegative132920 - 13375629613.4
amino acid abc transporter permeaseBJF93_12385Not AvailableNegative133833 - 13448323170.9
abc transporter permeaseBJF93_12390Not AvailableNegative134494 - 13516224130.4
3-carboxy-cis,cis-muconate cycloisomeraseBJF93_12395Not AvailableNegative135412 - 13649738211.2
protocatechuate 3,4-dioxygenase subunit alphaBJF93_12400Not AvailableNegative136533 - 13715322650.8
protocatechuate 3,4-dioxygenase subunit betaBJF93_12405Not AvailableNegative137155 - 13789527692.1

Displaying genes 131 – 140 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.