Rhizobium oryzae str. 1.7048

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Xaviernesmea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusXaviernesmea
SpeciesXaviernesmea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xaviernesmea oryzae strain 1.7048 scaffold9, whole genome shotgun

Gene Summary

Adenine Count

1006706 bp

Thymine Count

999136 bp

Guanine Count

1693125 bp

Cytosine Count

1691729 bp

Genome Length

5391466 bp

Protein-coding Genes

4616 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose 5-phosphate isomerase aBJF93_00330Not AvailableNegative1373697 - 137438923969.2
phosphoglycolate phosphataseBJF93_00335Not AvailablePositive1374843 - 137547823036.7
thiamine abc transporter permeaseBJF93_00340Not AvailablePositive1375748 - 137746362281.5
peptidase s41BJF93_00345Not AvailableNegative1377722 - 137904446480.6
tetr family transcriptional regulatorBJF93_00350Not AvailableNegative1379130 - 137985225992.1
hypothetical proteinBJF93_00355Not AvailablePositive1379915 - 138043919802.8
peptidoglycan-binding proteinBJF93_00360Not AvailableNegative1380533 - 138242568664.3
fumarate hydratase, class iiBJF93_00365Not AvailablePositive1382892 - 138428349098.6
diguanylate cyclaseBJF93_00370Not AvailablePositive1384449 - 138551939434.8
hypothetical proteinBJF93_00375Not AvailableNegative1385595 - 138679143795.0

Displaying genes 1181 – 1190 of 4684 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.