Methylobacterium nodulans ORS 2060

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylobacteriaceae

Genus

Methylobacterium

Description

In 2001 Methylobacterium, which had been hitherto found associated non-symbiotically with plants, was discovered to nodulate Crotalaria, a large Fabaceae group found in Africa. Strain ORS 2060 (also known as CNCM I 2342T=LMG 21967T), the type strain for this species, was isolated from nodules on C. podocarpa from the Bel-Air area, Dakar, Senegal. It is able to use C1 compounds such as methanol, formate and formaldehyde but not methylamine as its sole carbon source, as well as more complex carbon sources such as succinate, citrate, pyruvate, glutamate and ethanol. It grows as short asporogenous Gram-negative rods that occur singly or occasionally in pairs; some are motile with one or more polar flagella. Optimal growth occurs at pH 6.8-7.5 and at 30-37 degrees C. It is strictly aerobic and unpigmented (adapted from PubMed 15545469 and http://genome.jgi-psf.org/finished_microbes/metno/metno.home.html). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylobacteriaceae
GenusMethylobacterium
SpeciesMethylobacterium nodulans
StrainORS 2060

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Methylobacterium nodulans ORS 2060
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature32
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceMethylotroph
PathogenicityNo

Genome Summary

Methylobacterium nodulans ORS 2060 plasmid pMNOD07, complete

Gene Summary

Adenine Count

1593 bp

Thymine Count

1627 bp

Guanine Count

3320 bp

Cytosine Count

3289 bp

Genome Length

9829 bp

Protein-coding Genes

7 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cache domain-containing proteinMNOD_RS11475Not AvailablePositive2479049 - 248077661470.6
abc transporter substrate-binding proteinMNOD_RS11480Not AvailableNegative2480951 - 248193134474.5
nad(p)/fad-dependent oxidoreductaseMNOD_RS11485Not AvailableNegative2482248 - 248353445567.7
amino acid abc transporter atp-binding proteinMNOD_RS11490Not AvailableNegative2483558 - 248428926400.2
amino acid abc transporter permeaseMNOD_RS11495Not AvailableNegative2484286 - 248493923443.6
abc transporter substrate-binding proteinMNOD_RS11500Not AvailableNegative2484959 - 248573227588.8
duf1476 domain-containing proteinMNOD_RS11505Not AvailablePositive2486822 - 248719013157.8
helix-turn-helix domain-containing proteinMNOD_RS11510Not AvailableNegative2487620 - 24878388118.0
duf4113 domain-containing proteinMNOD_RS11515Not AvailableNegative2488037 - 248837812155.7
hypothetical proteinMNOD_RS11520Not AvailablePositive2488512 - 248900016999.4

Displaying genes 2901 – 2910 of 8224 in total

Metabolites

1759 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1759 metabolites

Health Effects

No health effects information available for this bacterium.