Natranaerobius thermophilus JW/NM-WN-LF

Gram-positiveRodNon-motileObligate anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Natranaerobiales

Family

Natranaerobiaceae

Genus

Natranaerobius

Description

Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) is a poly-extremophile (halophilic alkalithermophiles), obligately anaerobic Gram-positive bacterium isolated from sediment of alkaline, hypersaline Lake Fazda located in the Wadi An Natrun, Egypt. The halophilic alkalithermophilic bacteria are a novel group of extremophiles that have been recently recognized. They are adapted to grow at a combination of three extreme environmental conditions, elevated temperature, alkaline pH and elevated NaCl concentration, an evolutionarily interesting combination. It is assumed that haloalkalithermophiles combine adaptive mechanisms of halophiles, alkaliphiles and thermophiles. Natranaerobius thermophilus is able to grow in batch culture between 30 and 57 degrees Celsius, with an optimum at 53 degrees Celsius, and utilizes fructose, cellobiose, ribose, sucrose, trehalose, trimethylamine, pyruvate, casamino acids, acetate, xylose, and peptone as carbon and energy sources. Fumarate, thiosulfate, nitrate, and ferric citrate are utilized as electron acceptors. Cells are rod-shaped, non-motile and non-sporeforming. Phylogenetically, N. thermophilus forms a novel lineage within the class Clostridia, and belongs to the novel family Natranaerobiaceae and novel order, NatranaerobialesElucidation of adaptive mechanisms of multi-extremophilic microorganisms will extend the present understanding of the boundaries under which life can exist and will provide excellent models for the study of adaptive mechanisms to extreme environmental conditions. Availability of a genome sequence for a haloalkalithermophile will also contribute to the field of astrobiology and will help in evaluating some of the presently available hypotheses on the origin of life. In addition, sequencing the genome of a multi-extremophile will also impact biotechnology. Haloalkalithermophiles are potential sources of enzymes uniquely adapted to activity at high salt concentrations, pH and high temperatures. These "extremozymes" have the additional advantage of being more stable to detergents, organic solvents and chaotropic agents than mesophilic enzymes. (HAMAP: NATTJ)

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderNatranaerobiales
FamilyNatranaerobiaceae
GenusNatranaerobius
SpeciesNatranaerobius thermophilus
StrainJW/NM-WN-LF

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Natranaerobius thermophilus JW/NM-WN-LF
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsObligate anaerobe
Optimal temperatureNot Available
Temperature rangeThermophilic
HabitatSpecialized
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Natranaerobius thermophilus JW/NM-WN-LF


Gene Summary

Adenine Count

1010636 bp

Thymine Count

1005118 bp

Guanine Count

576926 bp

Cytosine Count

572877 bp

Genome Length

3165557 bp

Protein-coding Genes

2930 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaNTHER_RS00005Not Available+146 - 150752094.0
dna polymerase iii subunit betaNTHER_RS00010Not Available+1780 - 289242512.9
s4 domain-containing protein yaaaNTHER_RS00015Not Available+2912 - 31338392.12
dna replication/repair protein recfNTHER_RS00020Not Available+3167 - 432745024.1
duf721 domain-containing proteinNTHER_RS00025Not Available+4308 - 521035177.5
extracellular matrix regulator rembNTHER_RS00030Not Available+5218 - 551711575.6
dna topoisomerase (atp-hydrolyzing) subunit bNTHER_RS00035Not Available+5587 - 750972816.6
dna gyrase subunit aNTHER_RS00040Not Available+7594 - 1001791032.6
hypothetical proteinNTHER_RS15835Not Available+10331 - 105287332.64
16s ribosomal rnaNot AvailableNot Available+10534 - 12073Not Available

Displaying genes 1 – 10 of 3006 in total

Metabolites

36 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002833FMNH2C17H21N4O9PChemical structure of FMNH25666-16-0
Average456.3438Da
Monoisotopic456.1046148Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00030584-CDP-2-C-methyl-D-erythritol 2-phosphateC14H22N3O17P3Chemical structure of 4-CDP-2-C-methyl-D-erythritol 2-phosphateNot available
Average597.257Da
Monoisotopic597.0184016Da

Displaying 1–10 of 36 metabolites