Clostridium sp. 7_2_43FAA

Anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. 7_2_43FAA is a Gram-positive, rod-shaped bacterium that thrives in mesophilic temperature ranges, classified as a chemoheterotroph and an obligate anaerobe. This microorganism is primarily found in the human gut, as well as in various environmental niches such as soil and anaerobic sediments.Being Gram-positive, Clostridium sp. 7_2_43FAA retains the crystal violet stain due to its thick peptidoglycan layer in the cell wall, which provides resistance to environmental stresses. Its rod shape helps in motility, primarily through flagella, facilitating its movement in the anaerobic environments where it typically resides. The mesophilic preference indicates that it performs optimally at moderate temperatures, typically between 20°C and 45°C, which aligns with the intestinal habitat of its human host. As a chemoheterotroph, Clostridium sp. 7_2_43FAA derives its energy from the organic compounds it decomposes, playing a significant role in the degradation of complex carbohydrates and proteins within the gut microbiota. Its classification as an obligate anaerobe means that it cannot survive in the presence of oxygen, relying instead on fermentation processes to generate energy. Clostridium sp. 7_2_43FAA has garnered interest for its potential applications in biotechnology, particularly in bioremediation and in the production of biofuels, due to its efficient metabolic pathways. Additionally, it is studied for its role in the human microbiome, where it contributes to the complex interplay of gut health and disease, emphasizing the delicate balance between beneficial and pathogenic bacteria. This organism, like many in the Clostridium genus, has been linked to various metabolic conditions, making it a focal point of research in microbiology and health sciences.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. 7_2_43FAA
StrainNo strain

Profile

Physiology
Gram staining propertiesUncharacterized
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. 7_2_43FAA cont2.58, whole genome shotgun sequence.

Gene Summary

Adenine Count

1381757 bp

Thymine Count

1367540 bp

Guanine Count

536123 bp

Cytosine Count

522402 bp

Genome Length

3807822 bp

Protein-coding Genes

3367 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-pheNot AvailableNot AvailablePositive3528280 - 3528355Not Available
hypothetical proteinCSBG_03423Not AvailableNegative3529739 - 353096546224.5
hypothetical proteinCSBG_03422Not AvailableNegative3530965 - 353187333784.4
1,4-alpha-glucan branching enzymeCSBG_03421Not AvailablePositive3532202 - 353417877089.6
glycogen/starch synthase, adp-glucose typeCSBG_03420Not AvailablePositive3534213 - 353565855475.1
glucose-1-phosphate adenylyltransferaseCSBG_03419Not AvailablePositive3535698 - 353688243977.3
glucose-1-phosphate adenylyltransferase, glgd subunitCSBG_03418Not AvailablePositive3536896 - 353800242113.5
glycogen/starch/alpha-glucan phosphorylaseCSBG_03554Not AvailablePositive3539805 - 354224093893.4
glucose-1-phosphate adenylyltransferaseCSBG_03425Not AvailablePositive3542420 - 354358043256.8
glucose-1-phosphate adenylyltransferase, glgd subunitCSBG_03426Not AvailablePositive3543597 - 354468541431.8

Displaying genes 3241 – 3250 of 3480 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

342 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da

Displaying 1–10 of 342 metabolites

Health Effects

No health effects information available for this bacterium.