Methanoregula boonei 6A8

RodNon-motileAnaerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanomicrobiales

Family

Methanoregulaceae

Genus

Methanoregula

Description

Methanoregula boonei (strain 6A8) is an acidophilic archaeon phylogenetically associated with the kingdom Euryarchaeota. This organism was isolated from an acidic peat bog in New York State. It has an optimum pH of 5 and pH range between 4 and 6. Candidatus Methanoregula boonei (strain 6A8) represents a group of microorganisms previously identified only by 16S rRNA analysis. (HAMAP: METB6)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanomicrobiales
FamilyMethanoregulaceae
GenusMethanoregula
SpeciesMethanoregula boonei
Strain6A8

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Methanoregula boonei 6A8, complete sequence.

Gene Summary

Adenine Count

580142 bp

Thymine Count

576551 bp

Guanine Count

693876 bp

Cytosine Count

692374 bp

Genome Length

2542943 bp

Protein-coding Genes

2501 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ipt/tig domain-containing proteinMBOO_RS10890Not AvailableNegative2162783 - 216375432960.6
hypothetical proteinMBOO_RS10895Not AvailableNegative2163893 - 216472629498.0
thiamine pyrophosphate-dependent enzymeMBOO_RS10900Not AvailableNegative2164785 - 216563631638.8
2-oxoacid:acceptor oxidoreductase subunit alphaMBOO_RS10905Not AvailableNegative2165633 - 216729459182.3
response regulatorMBOO_RS10910Not AvailableNegative2167389 - 216777814384.4
duf1894 domain-containing proteinMBOO_RS10915Not AvailableNegative2167911 - 216819210550.8
duf1890 domain-containing proteinMBOO_RS10920Not AvailableNegative2168180 - 216867417597.6
divalent-cation tolerance protein cutaMBOO_RS10925Not AvailableNegative2168740 - 216908412654.3
ll-diaminopimelate aminotransferaseMBOO_RS10930Not AvailablePositive2169201 - 217034941794.2
diaminopimelate decarboxylaseMBOO_RS10935Not AvailablePositive2170346 - 217163846184.7

Displaying genes 2161 – 2170 of 2553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

92 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002243S-methyl-5'-thioinosineC11H14N4O4SChemical structure of S-methyl-5'-thioinosineNot available
Average298.32Da
Monoisotopic298.0735761Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003107S-inosyl-L-homocysteineC14H19N5O6SChemical structure of S-inosyl-L-homocysteineNot available
Average385.396Da
Monoisotopic385.1056041Da

Displaying 1–10 of 92 metabolites

Health Effects

No health effects information available for this bacterium.