Methanoregula boonei 6A8

RodNon-motileAnaerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanomicrobiales

Family

Methanoregulaceae

Genus

Methanoregula

Description

Methanoregula boonei (strain 6A8) is an acidophilic archaeon phylogenetically associated with the kingdom Euryarchaeota. This organism was isolated from an acidic peat bog in New York State. It has an optimum pH of 5 and pH range between 4 and 6. Candidatus Methanoregula boonei (strain 6A8) represents a group of microorganisms previously identified only by 16S rRNA analysis. (HAMAP: METB6)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanomicrobiales
FamilyMethanoregulaceae
GenusMethanoregula
SpeciesMethanoregula boonei
Strain6A8

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Methanoregula boonei 6A8, complete sequence.

Gene Summary

Adenine Count

580142 bp

Thymine Count

576551 bp

Guanine Count

693876 bp

Cytosine Count

692374 bp

Genome Length

2542943 bp

Protein-coding Genes

2501 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4352 domain-containing proteinMBOO_RS10000Not AvailableNegative1984612 - 198511517831.3
pinc/vapc family atpaseMBOO_RS10005Not AvailablePositive1986291 - 198826771823.8
leucine--trna ligaseMBOO_RS10010Not AvailablePositive1988320 - 1991100105588.0
ykgj family cysteine cluster proteinMBOO_RS10015Not AvailableNegative1991382 - 199190319151.9
duf5611 family proteinMBOO_RS10020Not AvailableNegative1991972 - 199228911834.1
proteasome assembly chaperone family proteinMBOO_RS10025Not AvailablePositive1992325 - 199305326165.9
duf473 domain-containing proteinMBOO_RS10030Not AvailablePositive1993060 - 199345814610.5
Trna-argNot AvailableNot AvailablePositive1993588 - 1993662Not Available
nusa-like transcription termination signal-binding factorMBOO_RS10040Not AvailableNegative1993770 - 199423416868.2
50s ribosomal protein l30eMBOO_RS10045Not AvailableNegative1994236 - 199452910437.6

Displaying genes 1981 – 1990 of 2553 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

92 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002243S-methyl-5'-thioinosineC11H14N4O4SChemical structure of S-methyl-5'-thioinosineNot available
Average298.32Da
Monoisotopic298.0735761Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003107S-inosyl-L-homocysteineC14H19N5O6SChemical structure of S-inosyl-L-homocysteineNot available
Average385.396Da
Monoisotopic385.1056041Da

Displaying 1–10 of 92 metabolites

Health Effects

No health effects information available for this bacterium.