Thermus parvatiensis str. RL

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Thermus

Description

Taxonomy

Kingdom	Thermotogati
Phylum	Deinococcota
Class	Deinococci
Order	Thermales
Family	Thermaceae
Genus	Thermus
Species	Thermus parvatiensis
Strain	RL

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Yes
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	70
Temperature range	Not Available
Habitat	hot water spring
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Thermus parvatiensis strain RL chromosome, complete genome.

NZ_CP014141.1 NZ_CP014142.1

Gene Summary

Adenine Count

293627 bp

Thymine Count

295528 bp

Guanine Count

640498 bp

Cytosine Count

643168 bp

Genome Length

1872821 bp

Protein-coding Genes

2011 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
sugar phosphate nucleotidyltransferase	AV541_RS11740	Not Available	Positive	662 - 838	6283.51
sugar phosphate nucleotidyltransferase	AV541_RS11745	Not Available	Positive	841 - 1425	21347.5
hypothetical protein	AV541_RS11750	Not Available	Positive	1472 - 1681	7476.01
pseudouridine synthase	AV541_RS00015	Not Available	Positive	1685 - 2563	30008.7
pseudouridine synthase	AV541_RS13270	Not Available	Positive	2661 - 3084	15678.5
pseudouridine synthase	AV541_RS00025	Not Available	Negative	3035 - 3424	14422.1
pseudouridine synthase	AV541_RS00030	Not Available	Negative	3421 - 3833	15025.9
pseudouridine synthase	AV541_RS00035	Not Available	Positive	3963 - 5065	41060.7
alpha-ketoacid dehydrogenase subunit beta	AV541_RS00040	Not Available	Positive	5075 - 6049	35152.7
pseudouridine synthase	AV541_RS00045	Not Available	Positive	6058 - 7415	48618.6

Displaying genes 41 – 50 of 2267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000259	3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000344	(2R,3S)-homoisocitrateC7H7O7	Not available	Average203.128Da Monoisotopic203.020823305Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003456	1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2	Not available	Average573.2993Da Monoisotopic573.0509381Da
BASm0003525	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2	Not available	Average573.303Da Monoisotopic573.0531333Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P	Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0004933	1-deoxy-11-oxopentalenateC15H19O3	Not available	Average247.315Da Monoisotopic247.1339681Da
BASm0004954	neopentalenolactone DC15H19O4	Not available	Average263.314Da Monoisotopic263.128882672Da

Displaying 1–10 of 24 metabolites

Health Effects

No health effects information available for this bacterium.