Thermus parvatiensis str. RL

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Thermus

Description

Taxonomy

Kingdom	Thermotogati
Phylum	Deinococcota
Class	Deinococci
Order	Thermales
Family	Thermaceae
Genus	Thermus
Species	Thermus parvatiensis
Strain	RL

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Yes
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	70
Temperature range	Not Available
Habitat	hot water spring
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Thermus parvatiensis strain RL chromosome, complete genome.

NZ_CP014141.1 NZ_CP014142.1

Gene Summary

Adenine Count

293627 bp

Thymine Count

295528 bp

Guanine Count

640498 bp

Cytosine Count

643168 bp

Genome Length

1872821 bp

Protein-coding Genes

2011 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
pseudouridine synthase	AV541_RS00940	Not Available	Negative	164216 - 166273	70765.1
comea family dna-binding protein	AV541_RS00945	Not Available	Negative	166260 - 166568	11069.8
hypothetical protein	AV541_RS00950	Not Available	Negative	166541 - 167203	23259.2
glycerophosphodiester phosphodiesterase	AV541_RS00955	Not Available	Positive	167226 - 167855	23421.4
inorganic diphosphatase	AV541_RS00960	Not Available	Positive	167866 - 168393	19191.2
hypothetical protein	AV541_RS00965	Not Available	Positive	168457 - 168951	17769.9
16s rrna (cytidine(1402)-2'-o)-methyltransferase	AV541_RS00970	Not Available	Positive	168953 - 169750	29210.5
6-phosphofructokinase	AV541_RS00975	Not Available	Positive	169747 - 170715	33544.7
hypothetical protein	AV541_RS11860	Not Available	Negative	170692 - 170973	9846.03
pseudouridine synthase	AV541_RS00985	Not Available	Negative	171240 - 173596	83300.8

Displaying genes 231 – 240 of 2267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000259	3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000344	(2R,3S)-homoisocitrateC7H7O7	Not available	Average203.128Da Monoisotopic203.020823305Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003456	1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2	Not available	Average573.2993Da Monoisotopic573.0509381Da
BASm0003525	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2	Not available	Average573.303Da Monoisotopic573.0531333Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P	Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0004933	1-deoxy-11-oxopentalenateC15H19O3	Not available	Average247.315Da Monoisotopic247.1339681Da
BASm0004954	neopentalenolactone DC15H19O4	Not available	Average263.314Da Monoisotopic263.128882672Da

Displaying 1–10 of 24 metabolites

Health Effects

No health effects information available for this bacterium.