Thermus parvatiensis str. RL

Kingdom

Thermotogati

Phylum

Deinococcota

Class

Deinococci

Order

Thermales

Family

Thermaceae

Genus

Thermus

Description

Taxonomy

Kingdom	Thermotogati
Phylum	Deinococcota
Class	Deinococci
Order	Thermales
Family	Thermaceae
Genus	Thermus
Species	Thermus parvatiensis
Strain	RL

Profile

Physiology
Gram staining properties	Negative
Shape	Not Available
Mobility	Not Available
Flagellar presence	Yes
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	70
Temperature range	Not Available
Habitat	hot water spring
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Thermus parvatiensis strain RL chromosome, complete genome.

NZ_CP014141.1 NZ_CP014142.1

Gene Summary

Adenine Count

293627 bp

Thymine Count

295528 bp

Guanine Count

640498 bp

Cytosine Count

643168 bp

Genome Length

1872821 bp

Protein-coding Genes

2011 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
phosphate abc transporter permease psta	AV541_RS00245	Not Available	Positive	34428 - 35633	44016.5
phosphate abc transporter atp-binding protein pstb	AV541_RS00250	Not Available	Positive	35627 - 36442	30461.2
mfs transporter	AV541_RS00255	Not Available	Positive	36452 - 37624	40516.4
pseudouridine synthase	AV541_RS00260	Not Available	Positive	37624 - 38653	35428.7
duf721 domain-containing protein	AV541_RS00265	Not Available	Positive	38638 - 39396	28227.2
lysm peptidoglycan-binding domain-containing c40 family peptidase	AV541_RS00270	Not Available	Positive	39397 - 40032	22750.5
pseudouridine synthase	AV541_RS00275	Not Available	Negative	39986 - 40905	34249.3
duf2939 domain-containing protein	AV541_RS00280	Not Available	Negative	40916 - 41446	19520.0
pseudouridine synthase	AV541_RS00285	Not Available	Negative	41454 - 42522	37855.2
pseudouridine synthase	AV541_RS00290	Not Available	Positive	42582 - 44113	54616.2

Displaying genes 91 – 100 of 2267 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000259	3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000344	(2R,3S)-homoisocitrateC7H7O7	Not available	Average203.128Da Monoisotopic203.020823305Da
BASm0001717	fumarateC4H2O4	Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001865	diphosphateHO7P2	Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0003389	NADP(+)C21H25N7O17P3	Not available	Average740.386Da Monoisotopic740.053624107Da
BASm0003456	1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2	Not available	Average573.2993Da Monoisotopic573.0509381Da
BASm0003525	5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2	Not available	Average573.303Da Monoisotopic573.0531333Da
BASm0003763	(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6P	Not available	Average285.1898Da Monoisotopic285.0402236Da
BASm0004933	1-deoxy-11-oxopentalenateC15H19O3	Not available	Average247.315Da Monoisotopic247.1339681Da
BASm0004954	neopentalenolactone DC15H19O4	Not available	Average263.314Da Monoisotopic263.128882672Da

Displaying 1–10 of 24 metabolites

Health Effects

No health effects information available for this bacterium.