Anaeromyxobacter dehalogenans 2CP-1

Gram-negativeRodMotileAerobe; anaerobe

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Myxococcales

Family

Anaeromyxobacteraceae

Genus

Anaeromyxobacter

Description

Anaeromyxobacter dehalogenans (strain 2CP-1) is a slender Gram-negative rod-shaped spore-forming soil bacterium. It is capable of a gliding motility and it forms a spore-like structure. It was first isolated by anaerobic enrichment from a Michigan soil sample on 2-chlorophenol and acetate followed by growth of single plate-grown colonies. It is the first Myxobacterium that is found capable of anaerobic respiration, wherein it is able to grow by coupling the oxidation of both acetate or hydrogen, which is a distinguishing property of the organism from other reducing populations, to the reduction of ortho-substituted halophenols, ferric iron, nitrate, nitrite, nitrous oxide, manganese oxide, uranium (VI) and fumarate. Of interest is its unique respiratory reduction of nitrate and nitrite to ammonia which is not linked to its ability to reduce nitrous oxide to nitrogen gas. These metal-reducing microorganisms are widely distributed in the environment. Anaeromyxobacter strains have been found in undisturbed and contaminated soils and sediments, and evidence shows they also exist in acidic subsurface sediments and agricultural soils. A. dehalogenans is an important model organism that exists as both as a productive dechlorinator and metal reducer. By studying the potential interferences between the competing substrates in contaminated environments we can further understand bioremediation efforts. (adapted from PubMed 11823233 and http://microbewiki.kenyon.edu/index.php/Anaeromyxobacter_dehalogenans). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumMyxococcota
ClassMyxococcia
OrderMyxococcales
FamilyAnaeromyxobacteraceae
GenusAnaeromyxobacter
SpeciesAnaeromyxobacter dehalogenans
Strain2CP-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Anaeromyxobacter dehalogenans 2CP-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Anaeromyxobacter dehalogenans 2CP-1


Gene Summary

Adenine Count

632543 bp

Thymine Count

639048 bp

Guanine Count

1878497 bp

Cytosine Count

1879241 bp

Genome Length

5029329 bp

Protein-coding Genes

4507 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf6600 domain-containing proteinA2CP1_RS23945Not Available-2666277 - 266773450710.7
atp-dependent clp protease atp-binding subunit clpxA2CP1_RS12125Not Available-2668031 - 266931447301.1
hypothetical proteinA2CP1_RS12130Not Available-2669426 - 267004022865.3
agmx/pgli c-terminal domain-containing proteinA2CP1_RS12135Not Available-2670048 - 267098032470.7
trna pseudouridine(38-40) synthase truaA2CP1_RS12140Not Available+2671064 - 267188228915.0
ribbon-helix-helix domain-containing proteinA2CP1_RS12145Not Available-2671988 - 26722128218.9
atp-dependent sacrificial sulfur transferase lareA2CP1_RS12150Not Available-2672394 - 267324830551.4
adenylyl-sulfate kinaseA2CP1_RS12155Not Available-2673285 - 267402826344.0
hesa/moeb/thif family proteinA2CP1_RS12160Not Available-2674338 - 267503023108.7
sulfurtransferase tusa family proteinA2CP1_RS12165Not Available-2675053 - 267533110095.2

Displaying genes 2441 – 2450 of 4575 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

50 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034561-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideNot available
Average573.2993Da
Monoisotopic573.0509381Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da
BASm0004092UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC41H61N9O28P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1189.924Da
Monoisotopic1189.312320676Da
BASm0004093di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC87H139N7O23P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1713.045Da
Monoisotopic1711.941952079Da
BASm0004094di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC95H152N8O28P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1916.239Da
Monoisotopic1915.021324602Da
BASm0004172(R)-4'-phosphopantetheineC11H21N2O7PSChemical structure of (R)-4'-phosphopantetheineNot available
Average356.33Da
Monoisotopic356.081806356Da
BASm0004925UDP-N-acetyl-alpha-D-muramateC20H28N3O19P2Chemical structure of UDP-N-acetyl-alpha-D-muramateNot available
Average676.395Da
Monoisotopic676.080870429Da
BASm00074613-deoxy-alpha-D-manno-oct-2-ulosonateC8H13O8Chemical structure of 3-deoxy-alpha-D-manno-oct-2-ulosonateNot available
Average237.185Da
Monoisotopic237.061591Da

Displaying 21–30 of 50 metabolites