Lysobacter soli str. KCTC 22011

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter soli strain KCTC 22011 is a Gram-negative, rod-shaped bacterium that exhibits aerobic respiration and thrives at an optimal temperature of approximately 29.0°C. As a member of the Lysobacter genus, this strain likely possesses the ability to utilize a variety of organic substrates, which is a characteristic feature of Lysobacter species. Gram-negative bacteria, including L. soli, are known for their complex cell wall structure, which includes an outer membrane that may contribute to their environmental resilience and adaptability. The aerobic nature of L. soli suggests that it requires oxygen for growth and metabolism, which may influence its distribution in various habitats. This oxygen requirement points to its potential ecological role in environments where oxygen is available, possibly contributing to the degradation of organic matter or participating in nutrient cycling. The optimal growth temperature of 29.0°C indicates that L. soli is well-suited to moderate temperature environments, which may include soil or decaying organic materials. Given its traits, L. soli could play a significant role in soil health and biogeochemical processes, particularly in ecosystems where decomposition and nutrient recycling are essential. Further studies could elucidate its specific interactions within microbial communities and its potential applications in biotechnology or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter soli
StrainKCTC 22011

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter soli str. KCTC 22011
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter soli strain KCTC 22011 contig27, whole genome shotgun

Gene Summary

Adenine Count

639030 bp

Thymine Count

637543 bp

Guanine Count

1332001 bp

Cytosine Count

1345168 bp

Genome Length

3953742 bp

Protein-coding Genes

3531 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4339 domain-containing proteinDX912_11560Not AvailablePositive2531420 - 253234032734.5
dna topoisomerase iDX912_11565Not AvailablePositive2532549 - 253505392192.8
trna threonylcarbamoyladenosine biosynthesis protein rimnDX912_11570Not AvailablePositive2535181 - 253574419614.5
duf4124 domain-containing proteinDX912_11575Not AvailablePositive2535821 - 253656126854.6
duf4124 domain-containing proteinDX912_11580Not AvailablePositive2536561 - 253717521372.7
coce/nond family hydrolaseDX912_11585Not AvailablePositive2537310 - 253920269230.2
protein-l-isoaspartate(d-aspartate) o-methyltransferaseDX912_11590Not AvailableNegative2539199 - 254119373358.1
sdr family oxidoreductaseDX912_11595Not AvailableNegative2541459 - 254223528171.3
hypothetical proteinDX912_11600Not AvailablePositive2542330 - 25425578083.8
signal peptide peptidase sppaDX912_11605Not AvailableNegative2542640 - 254452368224.0

Displaying genes 2301 – 2310 of 3587 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.