Ignicoccus hospitalis KIN4/I

Gram-negativeCocciNon-motileAnaerobe

Kingdom

Thermoproteati

Phylum

Thermoproteota

Class

Thermoprotei

Order

Desulfurococcales

Family

Desulfurococcaceae

Genus

Ignicoccus

Description

An anaerobic chemolithoautotrophic and hyperthermophilic archaeon, Ignicoccus hospitalis was isolated from a submarine hydrothermal system off the coast of Iceland. Optimal growth occurs at 90 degrees C utilizing molecular hydrogen, elemental sulfur, and carbon dioxide as the energy substrate, the electron acceptor, and the carbon source, respectively. It is the obligatory host of Nanoarchaeum equitans; up to a dozen N.equitans can be found on the surface of I.hospitalis without doing any apparent harm to the host. Ignicoccus species are unique among the Archaea in having two cell membranes; together with the cytoplasmic membrane, it encloses a huge periplasmic space, in which membrane-bound vesicles are found. I.hospitalis at 1.3 Mb has one of the smallest genomes among free-living bacteria and archaea, and shows signs of gene exchange with N.equitans as well as gene acquisition from Euryarchaeota and bacteria (adapted from PMID 19000309). (HAMAP: IGNH4)

Taxonomy

KingdomThermoproteati
PhylumThermoproteota
ClassThermoprotei
OrderDesulfurococcales
FamilyDesulfurococcaceae
GenusIgnicoccus
SpeciesIgnicoccus hospitalis
StrainKin4/I

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Ignicoccus hospitalis KIN4/I
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeHyperthermophilic
HabitatAquatic
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceChemolithoautotroph
PathogenicityNo

Genome Summary

Ignicoccus hospitalis KIN4/I, complete sequence.

Gene Summary

Adenine Count

281521 bp

Thymine Count

282644 bp

Guanine Count

366636 bp

Cytosine Count

366737 bp

Genome Length

1297538 bp

Protein-coding Genes

1478 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam proteinIGNI_RS05695Not AvailableNegative987188 - 98818036729.4
digeranylgeranylglycerophospholipid reductaseIGNI_RS05700Not AvailablePositive988278 - 98961249329.2
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseIGNI_RS05705Not AvailableNegative989588 - 99052633520.6
glutamate--trna ligaseIGNI_RS05710Not AvailableNegative990540 - 99222864688.8
thioredoxin family proteinIGNI_RS05715Not AvailableNegative992320 - 99265812822.8
hypothetical proteinIGNI_RS05720Not AvailableNegative992675 - 99321419476.8
phosphoenolpyruvate synthaseIGNI_RS05725Not AvailableNegative993306 - 99577191972.3
hypothetical proteinIGNI_RS05730Not AvailablePositive995854 - 99652825145.8
class i sam-dependent methyltransferaseIGNI_RS05735Not AvailableNegative996510 - 99704319457.3
duf1512 domain-containing proteinIGNI_RS05740Not AvailableNegative997040 - 99813740558.1

Displaying genes 1161 – 1170 of 1528 in total

Metabolites

205 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm00016962-heptyl-3-hydroxy-4(1H)-quinoloneC16H21NO2Chemical structure of 2-heptyl-3-hydroxy-4(1H)-quinoloneNot available
Average259.349Da
Monoisotopic259.15722892Da
BASm0001808corynebactinC39H42N6O18Chemical structure of corynebactinNot available
Average882.789Da
Monoisotopic882.2555585Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da

Displaying 1–10 of 205 metabolites

Health Effects

No health effects information available for this bacterium.