Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium indicum |
| Strain | UT26S |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium indicum UT26S plasmid pUT2, complete sequence.
Gene Summary
Adenine Count
1024 bp
Thymine Count
1082 bp
Guanine Count
1533 bp
Cytosine Count
1759 bp
Genome Length
5398 bp
Protein-coding Genes
7 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lpd7 domain-containing protein | SJA_RS02150 | Not Available | Negative | 464859 - 465728 | 32098.4 |
| type iv secretory system conjugative dna transfer family protein | SJA_RS02155 | P13464 | Negative | 465718 - 467682 | 70742.0 |
| p-type dna transfer atpase virb11 | SJA_RS02160 | Q9RNC7 | Negative | 467666 - 468670 | 36419.6 |
| type iv secretion system protein virb10 | SJA_RS02165 | Q6G2B2 | Negative | 468674 - 469900 | 42073.6 |
| p-type conjugative transfer protein virb9 | SJA_RS02170 | Q6FYW2 | Negative | 469904 - 470761 | 31367.2 |
| virb8 family protein | SJA_RS02175 | Q6G2B4 | Negative | 470758 - 471456 | 26316.0 |
| type iv secretion system protein | SJA_RS02180 | Not Available | Negative | 471797 - 472741 | 33632.2 |
| type iv secretion system protein | SJA_RS02185 | Not Available | Negative | 472978 - 473691 | 25214.8 |
| virb4 family type iv secretion/conjugal transfer atpase | SJA_RS02190 | Q9R2W4 | Negative | 473695 - 476112 | 89718.5 |
| type iv secretion system protein virb3 | SJA_RS02195 | P17793 | Negative | 476099 - 476449 | 12608.6 |
Pathways
1168 pathways
Health Effects
No health effects information available for this bacterium.

