Phenylobacterium zucineum HLK1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Caulobacterales

Family

Caulobacteraceae

Genus

Phenylobacterium

Description

The genus Phenylobacterium comprises 5 species, the first 4 of which were isolated from water or soil. Strain HLK1 was isolated from the human erythroleukemia cell line K562. It is a Gram-negative rod, motile with a polar flagellum that is strictly aerobic and nonfermentative. Its grows optimally at 37 degrees C between pH 6.5 and 7.5. It is a facultative intracellular organism and may have pathogenic relevance with humans and mammals, as it can infect at least HeLa cells. Unlike known intracellular pathogens, P. zucineum maintains a stable association with its host cell without apparently affecting the growth and morphology of the latter (modified from PubMed 16908113 and 18700039). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderCaulobacterales
FamilyCaulobacteraceae
GenusPhenylobacterium
SpeciesPhenylobacterium zucineum
StrainHLK1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Phenylobacterium zucineum HLK1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Phenylobacterium zucineum HLK1


Gene Summary

Adenine Count

60195 bp

Thymine Count

60273 bp

Guanine Count

132226 bp

Cytosine Count

130282 bp

Genome Length

382976 bp

Protein-coding Genes

386 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type iv secretion system proteinPHZ_RS19575Not Available+10546 - 1130127738.0
hypothetical proteinPHZ_RS23855Not Available+11331 - 115497926.12
type iv secretion system proteinPHZ_RS19580Not Available+11553 - 1249133119.4
hypothetical proteinPHZ_RS23800Not Available-12623 - 127544096.86
virb8 family proteinPHZ_RS19585Not Available+12816 - 1349625038.4
p-type conjugative transfer protein virb9PHZ_RS19590Not Available+13493 - 1432330212.0
type iv secretion system protein virb10PHZ_RS19595Not Available+14320 - 1554642544.3
p-type dna transfer atpase virb11PHZ_RS19600Not Available+15543 - 1654136438.9
type iv secretory system conjugative dna transfer family proteinPHZ_RS19605Not Available+16600 - 1698013567.8
is21-like element helper atpase istbPHZ_RS19610Not Available-17063 - 1782127834.6

Displaying genes 11 – 20 of 4346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites