Trichormus variabilis SAG 1403-4b

Gram-negativeFilamentousMotileAerobe

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Nostocales

Family

Nostocaceae

Genus

Trichormus

Description

Trichormus variabilis SAG 1403-4b is a Gram-negative, filamentous bacterium characterized by its single-cell arrangement and heterotrophic metabolism. This microbe thrives in a variety of habitats, indicating its adaptability to diverse environmental conditions. As an aerobe, T. variabilis requires oxygen for its metabolic processes, which aligns with its filamentous structure that may enhance its surface area for gas exchange and nutrient absorption. The filamentous morphology of T. variabilis suggests a potential role in biofilm formation, facilitating interactions within microbial communities. This structural adaptation may allow the bacterium to occupy various ecological niches where resources are available. Furthermore, its heterotrophic nature indicates that T. variabilis relies on organic compounds as energy sources, which may contribute to nutrient cycling in its environments. Given its characteristics, Trichormus variabilis SAG 1403-4b may play an essential role in the degradation of organic matter and the maintenance of microbial diversity in its habitats. Understanding the ecological functions of this filamentous microbe could provide insights into its contributions to ecosystem dynamics, particularly in environments where organic substrates are prevalent.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderNostocales
FamilyNostocaceae
GenusTrichormus
SpeciesTrichormus variabilis
StrainSAG 1403-4b

Profile

Physiology
Gram staining propertiesNegative
ShapeFilamentous
MobilityYes
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementFilaments - Singles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Trichormus variabilis SAG 1403-4b sequence54, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5155 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinDSM107003_43180Not AvailablePositive5053714 - 505438524392.7
ribosomal rna small subunit methyltransferase gDSM107003_43190Not AvailablePositive5054403 - 505515828147.8
hypothetical proteinDSM107003_43200Not AvailableNegative5055267 - 505607930638.3
hypothetical proteinDSM107003_43210Not AvailablePositive5056166 - 505654914054.0
isocitrate dehydrogenase (nadp+)DSM107003_43220Not AvailableNegative5056776 - 505819752213.8
gun4 domain-containing proteinDSM107003_43230Not AvailablePositive5058502 - 505921527008.4
abc transporter atp-binding proteinDSM107003_43240Not AvailablePositive5059421 - 506056042266.1
hypothetical proteinDSM107003_43250Not AvailableNegative5060734 - 506156429664.6
methylthioribose-1-phosphate isomeraseDSM107003_43260Not AvailableNegative5061581 - 506262437608.3
sam-dependent methyltransferaseDSM107003_43270Not AvailableNegative5062773 - 506347726299.0

Displaying genes 4381 – 4390 of 5212 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.