Kingdom
Bacillati
Phylum
Cyanobacteriota
Class
Cyanophyceae
Order
Nostocales
Family
Nostocaceae
Genus
Trichormus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Cyanobacteriota |
| Class | Cyanophyceae |
| Order | Nostocales |
| Family | Nostocaceae |
| Genus | Trichormus |
| Species | Trichormus variabilis |
| Strain | SAG 1403-4b |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Filamentous |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments - Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5155 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-b activity negative regulator | DSM107003_30290 | Not Available | Negative | 3545845 - 3546288 | 17153.4 |
| cytochrome b6-f complex subunit 4 | DSM107003_30300 | Not Available | Negative | 3546576 - 3547058 | 17542.8 |
| cytochrome b6 | DSM107003_30310 | Not Available | Negative | 3547306 - 3547953 | 24292.0 |
| carboxyl-terminal processing protease | DSM107003_30320 | Not Available | Positive | 3548313 - 3549548 | 44731.7 |
| mbl fold metallo-hydrolase | DSM107003_30330 | Not Available | Negative | 3549685 - 3550395 | 26519.9 |
| site-2 protease family protein | DSM107003_30340 | Not Available | Positive | 3550512 - 3552038 | 56222.9 |
| chromophore lyase cpcs/cpes | DSM107003_30350 | Not Available | Negative | 3552111 - 3552686 | 21091.7 |
| phycocyanobilin lyase | DSM107003_30360 | Not Available | Negative | 3552745 - 3553425 | 24872.9 |
| hypothetical protein | DSM107003_30370 | Not Available | Positive | 3553627 - 3554178 | 20741.9 |
| hypothetical protein | DSM107003_30380 | Not Available | Negative | 3554303 - 3555130 | 29440.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
