Pandoraea thiooxydans str. DSM 25325

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Pandoraea

Description

Pandoraea thiooxydans str. DSM 25325 is a Gram-negative, rod-shaped bacterium that exhibits versatile metabolic capabilities, functioning as an autotroph, lithotroph, and chemotroph. This microorganism thrives optimally at a temperature of 29.0°C and is strictly aerobic, requiring oxygen for its metabolic processes. As an autotroph, P. thiooxydans utilizes inorganic carbon sources for growth, which allows it to play a role in carbon cycling within its environment. Its lithotrophic and chemotrophic energy acquisition methods suggest that it can derive energy from inorganic compounds, positioning it as a potential contributor to biogeochemical processes, particularly in environments rich in sulfur and other minerals. The ability to thrive in aerobic conditions and utilize a range of energy sources indicates that P. thiooxydans may be well-adapted to specific ecological niches, such as those found in marine or terrestrial environments where sulfur compounds are prevalent. This adaptability could provide insights into its role in bioremediation or nutrient cycling in sulfur-rich habitats. Overall, the metabolic versatility of P. thiooxydans underscores its potential significance in microbial ecology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPandoraea
SpeciesPandoraea thiooxydans
StrainDSM 25325

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceautotroph; lithotroph; chemotroph
PathogenicityNot Available

Genome Summary

Pandoraea thiooxydans strain DSM 25325 chromosome, complete

Gene Summary

Adenine Count

819836 bp

Thymine Count

823245 bp

Guanine Count

1414023 bp

Cytosine Count

1407082 bp

Genome Length

4464186 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligaseABW99_RS02235Not AvailablePositive452218 - 45358249371.2
yqia/ycfp family alpha/beta fold hydrolaseABW99_RS02240Not AvailablePositive453625 - 45420621112.3
oxygenase mpab family proteinABW99_RS02245Not AvailableNegative454215 - 45514733462.0
holliday junction branch migration dna helicase ruvbABW99_RS02250Not AvailableNegative455180 - 45623838517.4
holliday junction branch migration protein ruvaABW99_RS02255Not AvailableNegative456284 - 45686520192.8
crossover junction endodeoxyribonuclease ruvcABW99_RS02260Not AvailableNegative456928 - 45747319232.5
copd family proteinABW99_RS02265Not AvailablePositive457609 - 45802516012.3
2-hydroxychromene-2-carboxylate isomeraseABW99_RS02270Not AvailablePositive458082 - 45869022325.5
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseABW99_RS02275Not AvailablePositive458757 - 45939521877.6
class i sam-dependent rna methyltransferaseABW99_RS02280Not AvailablePositive459482 - 46079247735.2

Displaying genes 451 – 460 of 4160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.