Escherichia coli SMS-3-5

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli SMS-3-5 is a species of bacteria that belongs to the family Enterobacteriaceae. This microbe prefers temperatures within the mesophilic range, thriving between 25°C and 40°C. In terms of metabolism, E. coli SMS-3-5 is a chemoheterotroph, meaning it cannot produce its own food andinstead relies on organic compounds as its energy source. E. coli SMS-3-5 produces energy through aerobic respiration, a process that involves the breakdown of glucose and other organic molecules in the presence of oxygen. The bacterium stains Gram-negative, characterized by the absence of a peptidoglycan layer in its cell wall. Its shape is rod-shaped, with a characteristic elongated morphology. E. coli SMS-3-5 has been isolated from various body sites, including the gastrointestinal tracts of animals and humans, as well as soil and water environments. The microbe is an obligate aerobe, requiring oxygen to grow and thrive. In fact, it is sensitive to anaerobic conditions and is unable to survive in the absence of oxygen. One of the most unique aspects of E. coli SMS-3-5 is its ability to biofilm formation, which allows it to adhere to surfaces and form complex communities with other microorganisms. This property has implications for its role in environmental and clinical settings, where it may contribute to the formation of biofilms and infections. Finally, E. coli SMS-3-5 has been found to possess a number of unique genetics features, including a plasmid-encoded tetracycline resistance gene. This has significant implications for its role in the spread of antimicrobial resistance in the environment and among humans. Additionally, its ability to form biofilms and resist antibiotics makes it a challenging target for treatment and control.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainSMS-3-5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli SMS-3-5
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli SMS-3-5 plasmid pSMS35_4, complete sequence.

Gene Summary

Adenine Count

984 bp

Thymine Count

1071 bp

Guanine Count

1035 bp

Cytosine Count

984 bp

Genome Length

4074 bp

Protein-coding Genes

3 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-allose transporter substrate-binding proteinECSMS35_RS22890Not AvailableNegative4656716 - 465765132927.7
murr/rpir family transcriptional regulatorECSMS35_RS22895Not AvailableNegative4657710 - 465860032364.1
bifunctional allose-6-phosphate isomerase/ribose-5-phosphate isomerase rpibECSMS35_RS22900Not AvailablePositive4658959 - 465940816074.3
ddrrrql repeat protein yjdpECSMS35_RS22905Not AvailablePositive4659477 - 465980613486.4
phosphonate metabolism protein phnpECSMS35_RS22910Not AvailableNegative4659841 - 466059927951.4
aminoalkylphosphonate n-acetyltransferaseECSMS35_RS22915Not AvailableNegative4660601 - 466103516570.8
ribose 1,5-bisphosphokinaseECSMS35_RS22920Not AvailableNegative4661022 - 466157920664.7
alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphataseECSMS35_RS22925Not AvailableNegative4661579 - 466271542047.9
phosphonate c-p lyase system protein phnlECSMS35_RS22930Not AvailableNegative4662712 - 466339224721.0
phosphonate c-p lyase system protein phnkECSMS35_RS22935Not AvailableNegative4663503 - 466426127837.6

Displaying genes 4491 – 4500 of 5066 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.