Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SMS-3-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli SMS-3-5 plasmid pSMS35_4, complete sequence.
Gene Summary
Adenine Count
984 bp
Thymine Count
1071 bp
Guanine Count
1035 bp
Cytosine Count
984 bp
Genome Length
4074 bp
Protein-coding Genes
3 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 subunit hyfd | ECSMS35_RS13315 | Not Available | Positive | 2689091 - 2690530 | 51803.7 |
| hydrogenase 4 membrane subunit | ECSMS35_RS13320 | Not Available | Positive | 2690542 - 2691192 | 23392.0 |
| hydrogenase 4 subunit f | ECSMS35_RS13325 | Not Available | Positive | 2691197 - 2692777 | 56651.4 |
| hydrogenase 4 catalytic subunit hyfg | ECSMS35_RS13330 | Not Available | Positive | 2692767 - 2694482 | 65072.1 |
| hydrogenase 4 subunit h | ECSMS35_RS13335 | Not Available | Positive | 2694492 - 2695037 | 20143.4 |
| hydrogenase 4 catalytic subunit hyfi | ECSMS35_RS13340 | Not Available | Positive | 2695034 - 2695792 | 28074.9 |
| hydrogenase 4 assembly chaperone hyfj | ECSMS35_RS13345 | Not Available | Positive | 2695785 - 2696198 | 15549.8 |
| dna-binding transcriptional regulator hyfr | ECSMS35_RS13350 | Not Available | Positive | 2696228 - 2698240 | 75279.6 |
| formate transporter focb | ECSMS35_RS13355 | Not Available | Positive | 2698262 - 2699110 | 30565.3 |
| ai-2e family transporter | ECSMS35_RS13360 | Not Available | Negative | 2699147 - 2700208 | 39196.9 |
Pathways
13113 pathways
Health Effects
No health effects information available for this bacterium.





