Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | SMS-3-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs - Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Escherichia coli SMS-3-5 plasmid pSMS35_4, complete sequence.
Gene Summary
Adenine Count
984 bp
Thymine Count
1071 bp
Guanine Count
1035 bp
Cytosine Count
984 bp
Genome Length
4074 bp
Protein-coding Genes
3 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-aminobutyrate transaminase | ECSMS35_RS09210 | Not Available | Negative | 1839045 - 1840310 | 44733.7 |
| gamma-glutamylputrescine oxidase | ECSMS35_RS09215 | Not Available | Negative | 1840348 - 1841628 | 47158.2 |
| aldehyde dehydrogenase puuc | ECSMS35_RS09220 | Not Available | Negative | 1841630 - 1843117 | 53441.6 |
| hth-type transcriptional regulator puur | ECSMS35_RS09225 | Not Available | Negative | 1843267 - 1843824 | 20092.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | ECSMS35_RS09230 | Not Available | Negative | 1843851 - 1844615 | 28014.7 |
| glutamate-putrescine ligase | ECSMS35_RS09235 | Not Available | Positive | 1844827 - 1846245 | 53180.2 |
| protein ymje | ECSMS35_RS29215 | Not Available | Positive | 1846394 - 1846558 | 5971.24 |
| putrescine/proton symporter puup | ECSMS35_RS09240 | Not Available | Positive | 1846548 - 1847933 | 50832.9 |
| ymja family protein | ECSMS35_RS09245 | Not Available | Positive | 1848067 - 1848312 | 9283.79 |
| abc transporter substrate-binding protein sapa | ECSMS35_RS09255 | Not Available | Positive | 1848625 - 1850268 | 61469.0 |
Pathways
13113 pathways
Health Effects
No health effects information available for this bacterium.





