Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pseudovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pseudovibrio |
| Species | Pseudovibrio sp. JE062 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sponge |
| Biotic relationship | sponge symbiont |
| Host(s) | Mycale laxissima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320816 bp
Thymine Count
1393010 bp
Guanine Count
1547078 bp
Cytosine Count
1456174 bp
Genome Length
5717078 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
114 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s_rrna | Not Available | Not Available | Positive | 623239 - 624717 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 624877 - 624953 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 624968 - 625043 | Not Available |
| 5s_rrna | Not Available | Not Available | Positive | 628228 - 628335 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 628394 - 628470 | Not Available |
| abc transporter atp-binding protein [nesiotobacter exalbescens] | - | O32151 | Negative | 628729 - 629841 | 40656.8 |
| carbohydrate abc transporter permease [nesiotobacter exalbescens] | - | Not Available | Negative | 629852 - 630739 | 32079.9 |
| sugar abc transporter permease [pseudovibrio axinellae] | - | Not Available | Negative | 630732 - 631640 | 34036.2 |
| carbohydrate abc transporter substrate-binding protein [pseudovibrio axinellae] | - | O06875 | Negative | 631710 - 632957 | 44802.4 |
| response regulator [nesiotobacter exalbescens] | - | P0AA18 | Positive | 633161 - 633877 | 26720.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.