Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pseudovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pseudovibrio |
| Species | Pseudovibrio sp. JE062 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sponge |
| Biotic relationship | sponge symbiont |
| Host(s) | Mycale laxissima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320816 bp
Thymine Count
1393010 bp
Guanine Count
1547078 bp
Cytosine Count
1456174 bp
Genome Length
5717078 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
114 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein [pseudovibrio ascidiaceicola] | - | Not Available | Positive | 4868347 - 4868670 | 11999.5 |
| atp-binding protein [pseudovibrio denitrificans] | - | Not Available | Positive | 4868663 - 4870777 | 78362.5 |
| multispecies: hypothetical protein [altererythrobacter] | - | Not Available | Positive | 4870848 - 4871243 | 14349.1 |
| hypothetical protein [pseudovibrio ascidiaceicola] | - | Not Available | Positive | 4871751 - 4872017 | 9924.66 |
| hypothetical protein [acetobacter sicerae] | - | Not Available | Negative | 4872195 - 4872932 | 28273.9 |
| Trna-thr | Not Available | Not Available | Positive | 4873350 - 4873425 | Not Available |
| type i secretion protein [pseudovibrio denitrificans] | - | A0A0C5CJR8 | Positive | 4875135 - 4879523 | 151712.0 |
| rna methyltransferase [pseudovibrio axinellae] | - | Q88DE7 | Negative | 4879645 - 4880514 | 31571.7 |
| Trna-tyr | Not Available | Not Available | Positive | 4880938 - 4881022 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 4881042 - 4881115 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.