Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pseudovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pseudovibrio |
| Species | Pseudovibrio sp. JE062 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sponge |
| Biotic relationship | sponge symbiont |
| Host(s) | Mycale laxissima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320816 bp
Thymine Count
1393010 bp
Guanine Count
1547078 bp
Cytosine Count
1456174 bp
Genome Length
5717078 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
114 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein [cohaesibacter haloalkalitolerans] | - | P0A3H3 | Positive | 3554613 - 3554888 | 9450.18 |
| Trna-val | Not Available | Not Available | Positive | 3555146 - 3555221 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3555256 - 3555331 | Not Available |
| hypothetical protein [pseudovibrio axinellae] | - | Not Available | Positive | 3555760 - 3556242 | 18015.6 |
| hypothetical protein [pseudovibrio ascidiaceicola] | - | Not Available | Negative | 3556326 - 3557588 | 45874.5 |
| peptidoglycan-binding protein [pseudovibrio ascidiaceicola] | - | Not Available | Negative | 3557776 - 3558894 | 40369.4 |
| Trna-asp | Not Available | Not Available | Positive | 3559274 - 3559350 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3559410 - 3559486 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3559532 - 3559608 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3559656 - 3559732 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.