Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Pseudovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Pseudovibrio |
| Species | Pseudovibrio sp. JE062 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | sponge |
| Biotic relationship | sponge symbiont |
| Host(s) | Mycale laxissima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1320816 bp
Thymine Count
1393010 bp
Guanine Count
1547078 bp
Cytosine Count
1456174 bp
Genome Length
5717078 bp
Protein-coding Genes
4969 genes
Non-Coding Genes
114 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein [pseudovibrio denitrificans] | - | Not Available | Positive | 3292207 - 3292695 | 16347.2 |
| multispecies: type iii secretion inner membrane ring lipoprotein sctj [pseudovibrio] | - | P55714 | Positive | 3292734 - 3293537 | 29018.2 |
| hypothetical protein [pseudovibrio ascidiaceicola] | - | Not Available | Positive | 3293554 - 3294279 | 26534.9 |
| multispecies: type iii secretion system stator protein sctl [pseudovibrio] | - | Not Available | Positive | 3294258 - 3294905 | 24217.0 |
| multispecies: escn/yscn/hrcn family type iii secretion system atpase [pseudovibrio] | - | Q7ARI8 | Positive | 3294905 - 3296281 | 49703.0 |
| multispecies: ysco family type iii secretion system apparatus protein [pseudovibrio] | - | Not Available | Positive | 3296278 - 3296757 | 18277.8 |
| hypothetical protein [pseudovibrio ascidiaceicola] | - | Not Available | Positive | 3296754 - 3297503 | 26845.6 |
| flim/flin family flagellar motor switch protein [pseudovibrio denitrificans] | - | Not Available | Positive | 3297500 - 3298552 | 37619.6 |
| type iii secretion system export apparatus subunit sctr [pseudovibrio hongkongensis] | - | P69980 | Positive | 3298624 - 3299268 | 23459.6 |
| type iii secretion system export apparatus subunit scts [pseudovibrio hongkongensis] | - | P69982 | Positive | 3299293 - 3299562 | 9712.26 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.