Aciduliprofundum boonei T469

CocciMotileAnaerobic

Kingdom

Methanobacteriati

Phylum

Thermoplasmatota

Class

Order

Family

Genus

Candidatus Aciduliprofundum

Description

Aciduliprofundum boonei (strain DSM 19572 / T469) is an obligate thermoacidophilic, anaerobic, chemolithoautotrophic archaeon isolated from hydrothermally heated black smoker wall at the Mid Atlantic Ridge depth 3650m. A. boonei grows at pH between 3.3 and 5.8 with an optimum temperature of 70 degrees Celsius. This organism is a chemoorganotroph, using iron and sulfur as electron donors. It produces chains of vesicles that during growth. (Adapted from PMID: 18445019). (HAMAP: ACIB4)

Taxonomy

Kingdom	Methanobacteriati
Phylum	Thermoplasmatota
Class	/taxonomy?kingdom=Methanobacteriati&level=klass&phylum=Thermoplasmatota
Order	/taxonomy?kingdom=Methanobacteriati&level=order&phylum=Thermoplasmatota
Family	/taxonomy?kingdom=Methanobacteriati&level=family&phylum=Thermoplasmatota
Genus	Candidatus Aciduliprofundum
Species	Candidatus Aciduliprofundum boonei
Strain	T469

Profile

Physiology
Gram staining properties	Not Available
Shape	Cocci
Mobility	Yes
Flagellar presence	Yes
Number of membranes	1

Ecology, Host, and Life Cycle
Oxygen requirements	Anaerobic
Optimal temperature	70
Temperature range	Thermophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Chemolithoautotroph
Pathogenicity	No

Genome Summary

Aciduliprofundum boonei T469

Gene Summary

Adenine Count

452189 bp

Thymine Count

452397 bp

Guanine Count

287479 bp

Cytosine Count

294713 bp

Genome Length

1486778 bp

Protein-coding Genes

1549 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
gbsr/marr family transcriptional regulator	ABOO_RS00355	Not Available	Negative	67092 - 67589	19159.2
50s ribosomal protein l16	ABOO_RS00360	Q6L152	Positive	67685 - 68200	19024.2
duf835 domain-containing protein	ABOO_RS00365	Not Available	Negative	68197 - 68784	22625.7
rsmb/nop family class i sam-dependent rna methyltransferase	ABOO_RS00370	P9WGX2	Negative	68819 - 69886	40858.3
30s ribosomal protein s12	ABOO_RS00375	Q6L0R4	Positive	70178 - 70606	16010.6
30s ribosomal protein s7	ABOO_RS00380	Q6L0R3	Positive	70612 - 71175	20903.6
elongation factor ef-2	ABOO_RS00385	Q6L200	Positive	71186 - 73390	82768.8
translation elongation factor ef-1 subunit alpha	ABOO_RS00390	P19486	Positive	73444 - 74718	47376.6
30s ribosomal protein s10	ABOO_RS00395	P28079	Positive	74742 - 75056	12038.8
dna integrity scanning protein disa nucleotide-binding domain protein	ABOO_RS00400	Not Available	Negative	75053 - 75850	30086.4

Displaying genes 71 – 80 of 1529 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P		Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000251	2-dehydropantoateC6H9O4		Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000377	(S)-malateC4H4O5		Not available	Average132.0716Da Monoisotopic132.005873238Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6		Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0001035	indole-3-pyruvateC11H8NO3		`35656-49-6`	Average202.1861Da Monoisotopic202.0504181Da
BASm0001167	triphosphateO10P3		`14127-68-5`	Average252.9153Da Monoisotopic252.8704308Da
BASm0001358	lactateC3H5O3		Not available	Average89.071Da Monoisotopic89.0244176Da
BASm0001717	fumarateC4H2O4		Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001772	maleateC4H2O4		Not available	Average114.057Da Monoisotopic113.996405704Da
BASm0001779	orotateC5H3N2O4		Not available	Average155.09Da Monoisotopic155.0098302Da

Displaying 1–10 of 78 metabolites

Health Effects

No health effects information available for this bacterium.