Aciduliprofundum boonei T469

CocciMotileAnaerobic

Kingdom

Methanobacteriati

Phylum

Thermoplasmatota

Class

Order

Family

Genus

Candidatus Aciduliprofundum

Description

Aciduliprofundum boonei (strain DSM 19572 / T469) is an obligate thermoacidophilic, anaerobic, chemolithoautotrophic archaeon isolated from hydrothermally heated black smoker wall at the Mid Atlantic Ridge depth 3650m. A. boonei grows at pH between 3.3 and 5.8 with an optimum temperature of 70 degrees Celsius. This organism is a chemoorganotroph, using iron and sulfur as electron donors. It produces chains of vesicles that during growth. (Adapted from PMID: 18445019). (HAMAP: ACIB4)

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature70
Temperature rangeThermophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemolithoautotroph
PathogenicityNo

Genome Summary

Aciduliprofundum boonei T469, complete sequence.

Gene Summary

Adenine Count

452189 bp

Thymine Count

452397 bp

Guanine Count

287479 bp

Cytosine Count

294713 bp

Genome Length

1486778 bp

Protein-coding Genes

1549 genes

Non-Coding Genes

37 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinABOO_RS08105Not AvailableNegative702511 - 70286713854.7
adenosylhomocysteinaseABOO_RS08110O28682Negative702901 - 70358126130.9
atp-binding proteinABOO_RS03705Not AvailableNegative703786 - 70486841996.0
Trna-valNot AvailableNot AvailablePositive704952 - 705024Not Available
dna topoisomerase vi subunit bABOO_RS03715Q12WQ0Positive705252 - 70719573507.7
dna topoisomerase iv subunit aABOO_RS03720O29322Positive707188 - 70827641516.9
hypothetical proteinABOO_RS03725Not AvailableNegative708259 - 70855511480.9
6,7-dimethyl-8-ribityllumazine synthaseABOO_RS03730O28152Negative708594 - 70901315422.8
riboflavin synthaseABOO_RS03735Q58584Negative709026 - 70951118069.9
adenylyltransferase/cytidyltransferase family proteinABOO_RS03740B5I9H4Negative709489 - 70993817381.3

Displaying genes 751 – 760 of 1529 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

78 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001358lactateC3H5O3Chemical structure of lactateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001772maleateC4H2O4Chemical structure of maleateNot available
Average114.057Da
Monoisotopic113.996405704Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da

Displaying 1–10 of 78 metabolites

Health Effects

No health effects information available for this bacterium.