Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | SAMN06295920_102128 | Not Available | Positive | 889996 - 890658 | 24216.3 |
| glutathione s-transferase | SAMN06295920_102129 | Not Available | Positive | 890837 - 891511 | 25402.0 |
| succinyldiaminopimelate desuccinylase | SAMN06295920_102130 | Not Available | Positive | 891594 - 892718 | 39412.3 |
| hypothetical protein | SAMN06295920_102131 | Not Available | Positive | 892823 - 894019 | 44968.6 |
| methylenetetrahydrofolate reductase (nadph) | SAMN06295920_102132 | Not Available | Positive | 894026 - 894955 | 32497.2 |
| quinohemoprotein ethanol dehydrogenase | SAMN06295920_102133 | Not Available | Negative | 894962 - 897061 | 75961.5 |
| regulatory protein, luxr family | SAMN06295920_102134 | Not Available | Negative | 897058 - 897885 | 29442.5 |
| hypothetical protein | SAMN06295920_102135 | Not Available | Negative | 897898 - 899088 | 44039.0 |
| salicylate hydroxylase | SAMN06295920_102136 | Not Available | Negative | 899103 - 900320 | 44755.6 |
| transcriptional regulator, iclr family | SAMN06295920_102137 | Not Available | Positive | 900483 - 901292 | 28752.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.