Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseSAMN06295920_102108Not AvailableNegative872275 - 87306627003.5
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_102109Not AvailableNegative873063 - 87382425927.5
acetyl-coa c-acetyltransferaseSAMN06295920_102110Not AvailableNegative873862 - 87504640136.2
hypothetical proteinSAMN06295920_102111Not AvailableNegative875062 - 87618939147.2
transcriptional regulator, tetr familySAMN06295920_102112Not AvailablePositive876258 - 87688123052.7
inorganic phosphate transporter, pit familySAMN06295920_102113Not AvailableNegative877075 - 87807334454.7
tigr00153 family proteinSAMN06295920_102114Not AvailableNegative878076 - 87924843882.4
urca family proteinSAMN06295920_102115Not AvailablePositive879520 - 87986411554.8
trehalose 6-phosphataseSAMN06295920_102116Not AvailablePositive880179 - 88093426757.4
glucoamylase (glucan-1,4-alpha-glucosidase), gh15 familySAMN06295920_102117Not AvailablePositive880931 - 88272767551.8

Displaying genes 961 – 970 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.