Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pilus assembly protein cpafSAMN06295920_10217Not AvailableNegative782667 - 78401649724.6
pilus assembly protein cpaeSAMN06295920_10218Not AvailableNegative784013 - 78517641090.9
pilus assembly protein cpacSAMN06295920_10219Not AvailableNegative785176 - 78647144911.9
pilus assembly protein cpabSAMN06295920_10220Not AvailableNegative786468 - 78736430759.3
hypothetical proteinSAMN06295920_10221Not AvailablePositive787854 - 78900839889.2
transcriptional regulator, asnc familySAMN06295920_10222Not AvailablePositive789337 - 78961810707.9
transcriptional regulator, lysr familySAMN06295920_10223Not AvailableNegative789591 - 79055634667.8
aminomuconate-semialdehyde/2-hydroxymuconate-6- semialdehyde dehydrogenaseSAMN06295920_10224Not AvailablePositive790639 - 79212953457.9
2-keto-4-pentenoate hydrataseSAMN06295920_10225Not AvailablePositive792126 - 79291727097.7
2-oxo-3-hexenedioate decarboxylaseSAMN06295920_10226Not AvailablePositive792914 - 79368727045.7

Displaying genes 871 – 880 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.