Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
beta-barrel assembly machine subunit bamaSAMN06295920_101735Not AvailableNegative737113 - 739857101505.0
site-2 protease. metallo peptidase. merops family m50bSAMN06295920_101736Not AvailableNegative739928 - 74106141372.2
1-deoxy-d-xylulose 5-phosphate reductoisomeraseSAMN06295920_101737Not AvailableNegative741058 - 74222140173.4
phosphatidate cytidylyltransferaseSAMN06295920_101738Not AvailableNegative742218 - 74302427281.3
undecaprenyl pyrophosphate synthetaseSAMN06295920_101739Not AvailableNegative743029 - 74377527283.6
ribosome recycling factorSAMN06295920_101740Not AvailableNegative743772 - 74432920339.3
uridylate kinaseSAMN06295920_101741Not AvailableNegative744342 - 74500123342.9
translation elongation factor ts (ef-ts)SAMN06295920_101742Not AvailableNegative745221 - 74614431708.9
small subunit ribosomal protein s2SAMN06295920_101743Not AvailableNegative746263 - 74701527128.5
hypothetical proteinSAMN06295920_101744Not AvailablePositive747257 - 7474848197.33

Displaying genes 831 – 840 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.