Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted secreted zn-dependent protease | SAMN06295920_101466 | Not Available | Positive | 472663 - 473217 | 20348.2 |
| nad-dependent deacetylase | SAMN06295920_101467 | Not Available | Positive | 473214 - 473918 | 25387.2 |
| gtp-binding protein era | SAMN06295920_101468 | Not Available | Negative | 474072 - 474965 | 32710.5 |
| rnase iii | SAMN06295920_101469 | Not Available | Negative | 474962 - 475630 | 24030.3 |
| protein of unknown function | SAMN06295920_101470 | Not Available | Positive | 475693 - 475869 | 6471.66 |
| hypothetical protein | SAMN06295920_101471 | Not Available | Negative | 475894 - 476172 | 10040.4 |
| flagellar protein flis | SAMN06295920_101472 | Not Available | Negative | 476231 - 476632 | 14766.9 |
| flagellar hook-associated protein 2 | SAMN06295920_101473 | Not Available | Negative | 476652 - 478283 | 54749.1 |
| flagellar biosynthetic protein flhb | SAMN06295920_101474 | Not Available | Negative | 478396 - 479535 | 40527.9 |
| flagellar biosynthetic protein flir | SAMN06295920_101475 | Not Available | Negative | 479539 - 480321 | 26320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.