Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrna interferase yafq | SAMN06295920_1375 | Not Available | Negative | 5422764 - 5423045 | 10994.1 |
| dna-damage-inducible protein j | SAMN06295920_1376 | Not Available | Negative | 5423032 - 5423295 | 9285.29 |
| uncharacterized conserved protein | SAMN06295920_1377 | Not Available | Negative | 5423680 - 5424177 | 17667.8 |
| hypothetical protein | SAMN06295920_1378 | Not Available | Negative | 5424197 - 5424787 | 19899.1 |
| transposase and inactivated derivatives, tnpa family | SAMN06295920_1381 | Not Available | Negative | 5424913 - 5427852 | 109486.0 |
| site-specific dna recombinase | SAMN06295920_1382 | Not Available | Positive | 5428009 - 5428560 | 19854.0 |
| hypothetical protein | SAMN06295920_1383 | Not Available | Positive | 5428557 - 5429345 | 28001.0 |
| mrna interferase yafq | SAMN06295920_1391 | Not Available | Negative | 5429836 - 5430156 | 12164.5 |
| dna-damage-inducible protein j | SAMN06295920_1392 | Not Available | Negative | 5430125 - 5430406 | 10284.3 |
| cold shock protein, cspa family | SAMN06295920_1393 | Not Available | Negative | 5430850 - 5431083 | 8861.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.