Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_1295 | Not Available | Positive | 5356024 - 5358771 | 102255.0 |
| superfamily ii dna or rna helicase | SAMN06295920_1296 | Not Available | Positive | 5358768 - 5360840 | 76828.1 |
| t5orf172 domain-containing protein | SAMN06295920_1297 | Not Available | Positive | 5360833 - 5362026 | 44294.2 |
| hypothetical protein | SAMN06295920_1298 | Not Available | Negative | 5362057 - 5362869 | 29952.4 |
| prophage cp4-57 regulatory protein (alpa) | SAMN06295920_1299 | Not Available | Positive | 5363301 - 5363725 | 16357.2 |
| hypothetical protein | SAMN06295920_1301 | Not Available | Positive | 5363882 - 5364112 | 8369.94 |
| type iv secretory pathway, vird2 components (relaxase) | SAMN06295920_1302 | Not Available | Negative | 5364113 - 5365156 | 38681.4 |
| mobilisation protein (mobc) | SAMN06295920_1303 | Not Available | Negative | 5365143 - 5365694 | 20003.2 |
| chromosome partitioning protein, parb family | SAMN06295920_1304 | Not Available | Negative | 5365966 - 5366991 | 37289.6 |
| chromosome partitioning protein | SAMN06295920_1305 | Not Available | Negative | 5366988 - 5367746 | 27969.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.