Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN06295920_12812 | Not Available | Positive | 5347290 - 5347859 | 19980.3 |
| hypothetical protein | SAMN06295920_12813 | Not Available | Negative | 5347932 - 5348180 | 8713.42 |
| hypothetical protein | SAMN06295920_12814 | Not Available | Negative | 5348233 - 5348787 | 19184.8 |
| hypothetical protein | SAMN06295920_12815 | Not Available | Negative | 5349105 - 5349272 | 6425.49 |
| molecular chaperone ibpa | SAMN06295920_12816 | Not Available | Negative | 5349354 - 5349833 | 18295.8 |
| hypothetical protein | SAMN06295920_12817 | Not Available | Negative | 5350055 - 5350180 | 4617.55 |
| hypothetical protein | SAMN06295920_1291 | Not Available | Positive | 5351472 - 5351837 | 13460.9 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN06295920_1292 | Not Available | Negative | 5352129 - 5353787 | 55719.9 |
| zn-dependent peptidase imma, m78 family | SAMN06295920_1293 | Not Available | Negative | 5354128 - 5355204 | 40267.8 |
| hypothetical protein | SAMN06295920_1294 | Not Available | Negative | 5355210 - 5355830 | 22347.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.