Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06295920_12611 | Not Available | Positive | 5305957 - 5306889 | 33603.1 |
| t/g mismatch-specific endonuclease | SAMN06295920_12612 | Not Available | Positive | 5306886 - 5307332 | 16957.2 |
| hypothetical protein | SAMN06295920_12613 | Not Available | Positive | 5307295 - 5307666 | 12960.9 |
| serine protease do | SAMN06295920_12614 | Not Available | Negative | 5307831 - 5308751 | 31385.3 |
| hypothetical protein | SAMN06295920_12615 | Not Available | Negative | 5308738 - 5308959 | 8144.63 |
| hypothetical protein | SAMN06295920_12616 | Not Available | Negative | 5309032 - 5309403 | 14026.0 |
| ti-type conjugative transfer relaxase traa | SAMN06295920_12617 | Not Available | Negative | 5309437 - 5312700 | 117953.0 |
| trac-like protein | SAMN06295920_12618 | Not Available | Positive | 5312895 - 5313146 | 8878.7 |
| conjugal transfer protein trad | SAMN06295920_12619 | Not Available | Positive | 5313169 - 5313390 | 7507.78 |
| type iv secretion system protein vird4 | SAMN06295920_12620 | Not Available | Positive | 5313423 - 5315951 | 89088.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.