Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toprim domain-containing protein | SAMN06295920_12418 | Not Available | Negative | 5274915 - 5275796 | 32325.0 |
| hypothetical protein | SAMN06295920_12419 | Not Available | Negative | 5275908 - 5276690 | 29613.7 |
| hypothetical protein | SAMN06295920_12420 | Not Available | Positive | 5277397 - 5277705 | 11915.2 |
| hypothetical protein | SAMN06295920_12421 | Not Available | Positive | 5277765 - 5278088 | 11389.7 |
| type iv secretion system protein virb1 | SAMN06295920_12422 | Not Available | Positive | 5278103 - 5278777 | 23501.9 |
| type iv secretion system protein virb2 | SAMN06295920_12423 | Not Available | Positive | 5278799 - 5279140 | 12135.5 |
| type iv secretion system protein virb3 | SAMN06295920_12424 | Not Available | Positive | 5279165 - 5279491 | 11615.5 |
| type iv secretion/conjugal transfer atpase, virb4 family | SAMN06295920_12425 | Not Available | Positive | 5279478 - 5280869 | 52820.9 |
| hypothetical protein | SAMN06295920_12426 | Not Available | Negative | 5280861 - 5280994 | 4896.04 |
| polysaccharide export outer membrane protein | SAMN06295920_1251 | Not Available | Negative | 5281315 - 5282478 | 40701.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.