Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron complex outermembrane recepter proteinSAMN06295920_12312Not AvailablePositive5247139 - 524943381699.8
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunitSAMN06295920_12313Not AvailableNegative5249494 - 525072344013.2
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_12314Not AvailableNegative5250728 - 525154328401.2
anthranilate 1,2-dioxygenase large subunitSAMN06295920_12315Not AvailablePositive5251687 - 525288945369.5
anthranilate 1,2-dioxygenase small subunitSAMN06295920_12316Not AvailablePositive5252879 - 525337918554.8
3,4-dihydroxy-9,10-secoandrosta-1,3, 5(10)-triene-9,17-dione 4,5-dioxygenaseSAMN06295920_12317Not AvailablePositive5253388 - 525432635161.5
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit/biphenyl 2,3-dioxygenase ferredoxin subunitSAMN06295920_12318Not AvailablePositive5254329 - 525464911750.0
predicted flavoprotein czco associated with the cation diffusion facilitator czcdSAMN06295920_12319Not AvailablePositive5254747 - 525622555177.3
transcriptional regulator, gntr familySAMN06295920_12320Not AvailableNegative5256282 - 525697726460.4
phenylpropionate dioxygenase alpha subunitSAMN06295920_12321Not AvailablePositive5257263 - 525855848269.4

Displaying genes 5031 – 5040 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.