Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylamine dehydrogenase heavy chain | SAMN06295920_12213 | Not Available | Negative | 5213552 - 5214694 | 41348.7 |
| cytochrome c | SAMN06295920_12214 | Not Available | Negative | 5214717 - 5215097 | 12960.1 |
| iron complex outermembrane recepter protein | SAMN06295920_12215 | Not Available | Negative | 5215120 - 5217312 | 80561.6 |
| transcriptional regulator, tetr family | SAMN06295920_12216 | Not Available | Positive | 5217487 - 5218140 | 24194.9 |
| transcriptional regulator, asnc family | SAMN06295920_12217 | Not Available | Negative | 5218241 - 5218714 | 17603.1 |
| hypothetical protein | SAMN06295920_12218 | Not Available | Positive | 5218824 - 5219033 | 7601.33 |
| peroxiredoxin | SAMN06295920_12219 | Not Available | Negative | 5219052 - 5219717 | 24044.8 |
| taurine dioxygenase | SAMN06295920_12220 | Not Available | Positive | 5219963 - 5220823 | 32138.1 |
| regulatory protein, fis family | SAMN06295920_12221 | Not Available | Negative | 5220853 - 5222598 | 64608.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN06295920_12222 | Not Available | Positive | 5222787 - 5225369 | 93439.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.