Rhizorhabdus histidinilytica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Rhizorhabdaceae

Genus

Rhizorhabdus

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilyRhizorhabdaceae
GenusRhizorhabdus
SpeciesRhizorhabdus histidinilytica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas histidinilytica strain UM2 genome assembly, contig:

Gene Summary

Adenine Count

892826 bp

Thymine Count

894003 bp

Guanine Count

1839144 bp

Cytosine Count

1847366 bp

Genome Length

5473339 bp

Protein-coding Genes

5156 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pqq-dependent catabolism-associated cxxcw motif proteinSAMN06295920_11942Not AvailableNegative5105221 - 510576919742.8
sulfur-oxidizing protein soxySAMN06295920_11943Not AvailablePositive5105845 - 510664528479.4
quinoprotein relay system zinc metallohydrolase 1SAMN06295920_11944Not AvailablePositive5106642 - 510759534061.9
hemolysin-type calcium-binding repeat-containing proteinSAMN06295920_11945Not AvailablePositive5107713 - 510881936935.8
outer membrane receptor proteins, mostly fe transportSAMN06295920_11946Not AvailableNegative5108850 - 511115681792.2
hypothetical proteinSAMN06295920_11947Not AvailableNegative5111216 - 51113564957.05
enoyl-coa hydrataseSAMN06295920_1201Not AvailablePositive5111451 - 511224828747.7
catechol 2,3-dioxygenaseSAMN06295920_1202Not AvailablePositive5112440 - 511307223685.9
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN06295920_1203Not AvailablePositive5113144 - 511390226139.3
ethd domain-containing proteinSAMN06295920_1204Not AvailableNegative5113963 - 511464625783.5

Displaying genes 4911 – 4920 of 5273 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.