Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus histidinilytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
892826 bp
Thymine Count
894003 bp
Guanine Count
1839144 bp
Cytosine Count
1847366 bp
Genome Length
5473339 bp
Protein-coding Genes
5156 genes
Non-Coding Genes
117 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295920_11852 | Not Available | Positive | 5051565 - 5052095 | 20163.5 |
| site-specific recombinase xerd | SAMN06295920_11853 | Not Available | Positive | 5052241 - 5053440 | 42367.8 |
| hypothetical protein | SAMN06295920_11854 | Not Available | Negative | 5053461 - 5054114 | 24728.6 |
| hypothetical protein | SAMN06295920_11855 | Not Available | Negative | 5054186 - 5054386 | 7495.58 |
| conjugative relaxase domain-containing protein, trwc/trai family | SAMN06295920_11856 | Not Available | Negative | 5054436 - 5057507 | 110634.0 |
| type iv conjugative transfer system coupling protein trad | SAMN06295920_11857 | Not Available | Negative | 5057507 - 5059813 | 85680.2 |
| hypothetical protein | SAMN06295920_11858 | Not Available | Negative | 5059803 - 5060090 | 10921.1 |
| hypothetical protein | SAMN06295920_11859 | Not Available | Positive | 5060648 - 5060866 | 8398.27 |
| hypothetical protein | SAMN06295920_11860 | Not Available | Negative | 5060986 - 5061105 | 4268.0 |
| enoyl-coa hydratase/isomerase | SAMN06295920_1191 | Not Available | Negative | 5061107 - 5061252 | 5287.33 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.